BLASTX nr result

ID: Dioscorea21_contig00033315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033315
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306849.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002281274.1| PREDICTED: myb-related protein Myb4 [Vitis v...   147   7e-34
ref|XP_002889589.1| hypothetical protein ARALYDRAFT_470636 [Arab...   146   2e-33
dbj|BAJ99860.1| predicted protein [Hordeum vulgare subsp. vulgare]    144   7e-33
ref|XP_004160588.1| PREDICTED: LOW QUALITY PROTEIN: myb-related ...   144   1e-32

>ref|XP_002306849.1| predicted protein [Populus trichocarpa] gi|222856298|gb|EEE93845.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/167 (47%), Positives = 98/167 (58%), Gaps = 20/167 (11%)
 Frame = -1

Query: 514 LRCGKSCRLRWTNYLRPDIKRGNFSKEEEDTIISLHQSLGNRWSAIAAQLPGRTDNEIKN 335
           LRCGKSCRLRW NYLRPDIKRGNFS+EEEDTII LH+ LGNRWSAIAA+LPGRTDNEIKN
Sbjct: 38  LRCGKSCRLRWINYLRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKN 97

Query: 334 VWHTYLKKRIDNN--VSGLXXXXXXXXXXXKCLETNAAEISAVDLSEXXXXXXXXXXXXX 161
           VWHT+LKKR++ N     +             L T+   + + +L+              
Sbjct: 98  VWHTHLKKRLEKNHVTPEIKGRSVDISRFDHELNTDQELLDSSNLAAGSDQTEEHRPISP 157

Query: 160 SMITEWTDTAI------------------EFPVVDESFWSEVMSVDS 74
              +  T + I                  +FP +DESFWSEV+S D+
Sbjct: 158 QQCSSDTSSLITGDIDISNNMCMKIESSDDFPEMDESFWSEVLSADN 204


>ref|XP_002281274.1| PREDICTED: myb-related protein Myb4 [Vitis vinifera]
          Length = 267

 Score =  147 bits (372), Expect = 7e-34
 Identities = 85/180 (47%), Positives = 101/180 (56%), Gaps = 17/180 (9%)
 Frame = -1

Query: 514 LRCGKSCRLRWTNYLRPDIKRGNFSKEEEDTIISLHQSLGNRWSAIAAQLPGRTDNEIKN 335
           LRCGKSCRLRW NYLRPDIKRGNFS+EEED II LH+ LGNRWSAIAA+LPGRTDNEIKN
Sbjct: 47  LRCGKSCRLRWVNYLRPDIKRGNFSREEEDAIIDLHEKLGNRWSAIAARLPGRTDNEIKN 106

Query: 334 VWHTYLKKRIDNNVSGLXXXXXXXXXXXKCLETNAAEISAVDLSEXXXXXXXXXXXXXSM 155
           VWHT LKKR+   ++             KC   +A +   V+L+              S 
Sbjct: 107 VWHTNLKKRLKKKLATPNSKGHSTAAASKCDSGSACQSEPVNLNFPGKISPQPSSSEFSS 166

Query: 154 IT-----------------EWTDTAIEFPVVDESFWSEVMSVDSDEPSLELLSRSNGDES 26
           IT                 E  D+   FP + ESFWS+ +S  SD  S+     +  DES
Sbjct: 167 ITDSPIRNMEIHMNTGIKDEQMDSLESFPEIHESFWSDALS--SDNSSMPTAFHTVNDES 224


>ref|XP_002889589.1| hypothetical protein ARALYDRAFT_470636 [Arabidopsis lyrata subsp.
           lyrata] gi|297335431|gb|EFH65848.1| hypothetical protein
           ARALYDRAFT_470636 [Arabidopsis lyrata subsp. lyrata]
          Length = 243

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/146 (53%), Positives = 96/146 (65%)
 Frame = -1

Query: 514 LRCGKSCRLRWTNYLRPDIKRGNFSKEEEDTIISLHQSLGNRWSAIAAQLPGRTDNEIKN 335
           LRCGKSCRLRW NYLRPDIKRGNF+  EEDTII+LHQ LGNRWSAIAA+LPGRTDNEIKN
Sbjct: 47  LRCGKSCRLRWINYLRPDIKRGNFTPHEEDTIINLHQILGNRWSAIAAKLPGRTDNEIKN 106

Query: 334 VWHTYLKKRIDNNVSGLXXXXXXXXXXXKCLETNAAEISAVDLSEXXXXXXXXXXXXXSM 155
           VWHT+LKKR+ +N               + L+  ++  S+ D+SE             + 
Sbjct: 107 VWHTHLKKRLHHNQDQNNKENFASTTAAERLQQQSS--SSADISEITTSGNNNDISNNNK 164

Query: 154 ITEWTDTAIEFPVVDESFWSEVMSVD 77
            +  T +     V+DESFWSEV+ +D
Sbjct: 165 DSA-TSSEDVLAVIDESFWSEVVLMD 189


>dbj|BAJ99860.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 242

 Score =  144 bits (363), Expect = 7e-33
 Identities = 84/181 (46%), Positives = 101/181 (55%), Gaps = 14/181 (7%)
 Frame = -1

Query: 514 LRCGKSCRLRWTNYLRPDIKRGNFSKEEEDTIISLHQSLGNRWSAIAAQLPGRTDNEIKN 335
           LRCGKSCRLRW NYLRPDI RGNF+ EEED II LH  LGNRWS IAA+LPGRTDNEIKN
Sbjct: 47  LRCGKSCRLRWINYLRPDIMRGNFTGEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKN 106

Query: 334 VWHTYLKKRIDNNVSGLXXXXXXXXXXXKCLETNAAEISAVDLSEXXXXXXXXXXXXXSM 155
           VWHT+LKKR+ ++                 + T+A E      +                
Sbjct: 107 VWHTHLKKRLQSSSKPSGQAAPKRKAKKPAVATSALEGPTSQPASSPGQSLPMSPEQSLS 166

Query: 154 ITEWTDTAI----EFPVVDESFWSE--VMSVDSDEPSLEL--------LSRSNGDESMDF 17
            +  TD++     EF  +D+SFWSE   MSVDS    LE          S S+ ++ MDF
Sbjct: 167 TSSATDSSSSESEEFQ-IDDSFWSETLAMSVDSSGSGLETSDTFGADSASPSSSNDEMDF 225

Query: 16  W 14
           W
Sbjct: 226 W 226


>ref|XP_004160588.1| PREDICTED: LOW QUALITY PROTEIN: myb-related protein Myb4-like
           [Cucumis sativus]
          Length = 285

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/74 (86%), Positives = 71/74 (95%)
 Frame = -1

Query: 514 LRCGKSCRLRWTNYLRPDIKRGNFSKEEEDTIISLHQSLGNRWSAIAAQLPGRTDNEIKN 335
           LRCGKSCRLRWTNYLRPDIKRGNF+KEEED II+LH+ LGNRWSAIAA+LPGRTDNEIKN
Sbjct: 47  LRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNRWSAIAAKLPGRTDNEIKN 106

Query: 334 VWHTYLKKRIDNNV 293
           VWHT+LKKR++ NV
Sbjct: 107 VWHTHLKKRLEKNV 120


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