BLASTX nr result

ID: Dioscorea21_contig00033310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033310
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450288.1| hypothetical protein SORBIDRAFT_05g003280 [S...    55   6e-06

>ref|XP_002450288.1| hypothetical protein SORBIDRAFT_05g003280 [Sorghum bicolor]
           gi|241936131|gb|EES09276.1| hypothetical protein
           SORBIDRAFT_05g003280 [Sorghum bicolor]
          Length = 250

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +1

Query: 97  PAESILIRIDDGFDWSDLNAAVFSREFSTKGSTNPKSMIQSHXXXXXXXXXLS-TSQRFS 273
           PAES  +RI D   WS++N  V+ R+ S K +TNPKS++++H          + TSQRFS
Sbjct: 12  PAESTRLRIGDEITWSEING-VYDRDDSLKENTNPKSLLKNHHPGAGPHANNNGTSQRFS 70

Query: 274 ANPK-LRAPIIGFS 312
            N K   APIIG S
Sbjct: 71  GNLKPTAAPIIGLS 84


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