BLASTX nr result
ID: Dioscorea21_contig00033308
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00033308 (551 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28088.3| unnamed protein product [Vitis vinifera] 266 2e-69 ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-... 266 2e-69 emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera] 266 2e-69 ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2... 262 3e-68 gb|AAM13399.1| MutS homolog 7 [Triticum aestivum] 261 7e-68 >emb|CBI28088.3| unnamed protein product [Vitis vinifera] Length = 1126 Score = 266 bits (680), Expect = 2e-69 Identities = 131/169 (77%), Positives = 147/169 (86%) Frame = +3 Query: 45 ILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYI 224 +L S KR+K N G + EVS+T SKFEWL+PS RDANRRRP D L+DKRTLYI Sbjct: 211 LLDSSKRLKLLQNSTTGNKNYGEVSDTT-SKFEWLDPSRKRDANRRRPGDALYDKRTLYI 269 Query: 225 PPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGK 404 PPD ++KMSASQKQYW++KCQYMD+VLFFKVGKFYELYELDAEIG KELDWKMT SGVGK Sbjct: 270 PPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGK 329 Query: 405 CRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551 CRQVGISE+GID+AV+KL ARGYKVGRMEQLETSEQAKARG++SVIQRK Sbjct: 330 CRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRK 378 >ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera] Length = 1122 Score = 266 bits (680), Expect = 2e-69 Identities = 131/169 (77%), Positives = 147/169 (86%) Frame = +3 Query: 45 ILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYI 224 +L S KR+K N G + EVS+T SKFEWL+PS RDANRRRP D L+DKRTLYI Sbjct: 209 LLDSSKRLKLLQNSTTGNKNYGEVSDTT-SKFEWLDPSRKRDANRRRPGDALYDKRTLYI 267 Query: 225 PPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGK 404 PPD ++KMSASQKQYW++KCQYMD+VLFFKVGKFYELYELDAEIG KELDWKMT SGVGK Sbjct: 268 PPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGK 327 Query: 405 CRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551 CRQVGISE+GID+AV+KL ARGYKVGRMEQLETSEQAKARG++SVIQRK Sbjct: 328 CRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRK 376 >emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera] Length = 1090 Score = 266 bits (680), Expect = 2e-69 Identities = 131/169 (77%), Positives = 147/169 (86%) Frame = +3 Query: 45 ILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYI 224 +L S KR+K N G + EVS+T SKFEWL+PS RDANRRRP D L+DKRTLYI Sbjct: 209 LLDSSKRLKLLQNSTTGNKNYGEVSDTT-SKFEWLDPSRKRDANRRRPGDALYDKRTLYI 267 Query: 225 PPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGK 404 PPD ++KMSASQKQYW++KCQYMD+VLFFKVGKFYELYELDAEIG KELDWKMT SGVGK Sbjct: 268 PPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGK 327 Query: 405 CRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551 CRQVGISE+GID+AV+KL ARGYKVGRMEQLETSEQAKARG++SVIQRK Sbjct: 328 CRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRK 376 >ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1| predicted protein [Populus trichocarpa] Length = 1107 Score = 262 bits (669), Expect = 3e-68 Identities = 129/168 (76%), Positives = 148/168 (88%) Frame = +3 Query: 48 LSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYIP 227 L+S KRVK + + E+S + SKFEWL+P+ IRDANRRRPNDPL+DK+TLY+P Sbjct: 200 LNSSKRVKPLQDPASLIKNHEEISNST-SKFEWLDPAQIRDANRRRPNDPLYDKKTLYLP 258 Query: 228 PDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGKC 407 PD +KKMSASQKQYWTVK QYMD++LFFKVGKFYELYELDAEIG KELDWKMT+SGVGKC Sbjct: 259 PDALKKMSASQKQYWTVKSQYMDVLLFFKVGKFYELYELDAEIGHKELDWKMTLSGVGKC 318 Query: 408 RQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551 RQVGISE+GIDDAVEKL ARGYKVGR+EQLETS+QAK+RGA+SVIQRK Sbjct: 319 RQVGISESGIDDAVEKLVARGYKVGRVEQLETSDQAKSRGANSVIQRK 366 >gb|AAM13399.1| MutS homolog 7 [Triticum aestivum] Length = 1160 Score = 261 bits (666), Expect = 7e-68 Identities = 122/174 (70%), Positives = 151/174 (86%) Frame = +3 Query: 30 NHNSLILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDK 209 N S + S K+VK++ GK E++E+ SKFEWLNP +IRDAN+RRP+DPL+DK Sbjct: 267 NSQSPLWGSNKKVKSAHCSPPGKMVHDEMAESARSKFEWLNPLNIRDANKRRPDDPLYDK 326 Query: 210 RTLYIPPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTV 389 RTL+IPPD ++KMS SQKQYW++KC+YMD++LFFKVGKFYELYE+DAEIGQKELDWKMT+ Sbjct: 327 RTLFIPPDALRKMSTSQKQYWSIKCKYMDVLLFFKVGKFYELYEVDAEIGQKELDWKMTI 386 Query: 390 SGVGKCRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551 SGVGKCRQVGISE+GIDDAVEKL ARGYKVGR+EQ+E++ QAK+RG +SVI+RK Sbjct: 387 SGVGKCRQVGISESGIDDAVEKLLARGYKVGRIEQMESAAQAKSRGPNSVIERK 440