BLASTX nr result

ID: Dioscorea21_contig00033308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033308
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28088.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   266   2e-69
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   266   2e-69
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   262   3e-68
gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]                     261   7e-68

>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  266 bits (680), Expect = 2e-69
 Identities = 131/169 (77%), Positives = 147/169 (86%)
 Frame = +3

Query: 45  ILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYI 224
           +L S KR+K   N   G +   EVS+T  SKFEWL+PS  RDANRRRP D L+DKRTLYI
Sbjct: 211 LLDSSKRLKLLQNSTTGNKNYGEVSDTT-SKFEWLDPSRKRDANRRRPGDALYDKRTLYI 269

Query: 225 PPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGK 404
           PPD ++KMSASQKQYW++KCQYMD+VLFFKVGKFYELYELDAEIG KELDWKMT SGVGK
Sbjct: 270 PPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGK 329

Query: 405 CRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551
           CRQVGISE+GID+AV+KL ARGYKVGRMEQLETSEQAKARG++SVIQRK
Sbjct: 330 CRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRK 378


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  266 bits (680), Expect = 2e-69
 Identities = 131/169 (77%), Positives = 147/169 (86%)
 Frame = +3

Query: 45  ILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYI 224
           +L S KR+K   N   G +   EVS+T  SKFEWL+PS  RDANRRRP D L+DKRTLYI
Sbjct: 209 LLDSSKRLKLLQNSTTGNKNYGEVSDTT-SKFEWLDPSRKRDANRRRPGDALYDKRTLYI 267

Query: 225 PPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGK 404
           PPD ++KMSASQKQYW++KCQYMD+VLFFKVGKFYELYELDAEIG KELDWKMT SGVGK
Sbjct: 268 PPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGK 327

Query: 405 CRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551
           CRQVGISE+GID+AV+KL ARGYKVGRMEQLETSEQAKARG++SVIQRK
Sbjct: 328 CRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRK 376


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  266 bits (680), Expect = 2e-69
 Identities = 131/169 (77%), Positives = 147/169 (86%)
 Frame = +3

Query: 45  ILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYI 224
           +L S KR+K   N   G +   EVS+T  SKFEWL+PS  RDANRRRP D L+DKRTLYI
Sbjct: 209 LLDSSKRLKLLQNSTTGNKNYGEVSDTT-SKFEWLDPSRKRDANRRRPGDALYDKRTLYI 267

Query: 225 PPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGK 404
           PPD ++KMSASQKQYW++KCQYMD+VLFFKVGKFYELYELDAEIG KELDWKMT SGVGK
Sbjct: 268 PPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGK 327

Query: 405 CRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551
           CRQVGISE+GID+AV+KL ARGYKVGRMEQLETSEQAKARG++SVIQRK
Sbjct: 328 CRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRK 376


>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  262 bits (669), Expect = 3e-68
 Identities = 129/168 (76%), Positives = 148/168 (88%)
 Frame = +3

Query: 48  LSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDKRTLYIP 227
           L+S KRVK   +     +   E+S +  SKFEWL+P+ IRDANRRRPNDPL+DK+TLY+P
Sbjct: 200 LNSSKRVKPLQDPASLIKNHEEISNST-SKFEWLDPAQIRDANRRRPNDPLYDKKTLYLP 258

Query: 228 PDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTVSGVGKC 407
           PD +KKMSASQKQYWTVK QYMD++LFFKVGKFYELYELDAEIG KELDWKMT+SGVGKC
Sbjct: 259 PDALKKMSASQKQYWTVKSQYMDVLLFFKVGKFYELYELDAEIGHKELDWKMTLSGVGKC 318

Query: 408 RQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551
           RQVGISE+GIDDAVEKL ARGYKVGR+EQLETS+QAK+RGA+SVIQRK
Sbjct: 319 RQVGISESGIDDAVEKLVARGYKVGRVEQLETSDQAKSRGANSVIQRK 366


>gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]
          Length = 1160

 Score =  261 bits (666), Expect = 7e-68
 Identities = 122/174 (70%), Positives = 151/174 (86%)
 Frame = +3

Query: 30  NHNSLILSSQKRVKASGNFGIGKETSAEVSETVNSKFEWLNPSSIRDANRRRPNDPLFDK 209
           N  S +  S K+VK++     GK    E++E+  SKFEWLNP +IRDAN+RRP+DPL+DK
Sbjct: 267 NSQSPLWGSNKKVKSAHCSPPGKMVHDEMAESARSKFEWLNPLNIRDANKRRPDDPLYDK 326

Query: 210 RTLYIPPDEMKKMSASQKQYWTVKCQYMDIVLFFKVGKFYELYELDAEIGQKELDWKMTV 389
           RTL+IPPD ++KMS SQKQYW++KC+YMD++LFFKVGKFYELYE+DAEIGQKELDWKMT+
Sbjct: 327 RTLFIPPDALRKMSTSQKQYWSIKCKYMDVLLFFKVGKFYELYEVDAEIGQKELDWKMTI 386

Query: 390 SGVGKCRQVGISEAGIDDAVEKLTARGYKVGRMEQLETSEQAKARGASSVIQRK 551
           SGVGKCRQVGISE+GIDDAVEKL ARGYKVGR+EQ+E++ QAK+RG +SVI+RK
Sbjct: 387 SGVGKCRQVGISESGIDDAVEKLLARGYKVGRIEQMESAAQAKSRGPNSVIERK 440


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