BLASTX nr result

ID: Dioscorea21_contig00033289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033289
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526091.1| PREDICTED: F-box only protein 13-like [Glyci...   131   6e-29
ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glyci...   131   6e-29
ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glyci...   129   3e-28
ref|NP_001240018.1| uncharacterized protein LOC100801096 [Glycin...   128   4e-28
ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucum...   127   1e-27

>ref|XP_003526091.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/106 (54%), Positives = 81/106 (76%), Gaps = 4/106 (3%)
 Frame = +1

Query: 1   SFCRLRLVCKRWNSVATSATFKIACSQIPCRDPWFLMVGQELNQSIVFDTSEWKWRSISH 180
           +F RL  VCKRW SVA SA+FK+ACS IP R+PWFLMV   LNQS++FD++E  W+ ++H
Sbjct: 49  TFFRLNSVCKRWKSVAASASFKLACSHIPSREPWFLMVAPNLNQSVIFDSAESTWKRLNH 108

Query: 181 RNLLY----RNTVPVASSGGLICFQTISSDFVIGNPLTGACHELPP 306
            +LL     ++ +PVA+SGGLIC++  S +F++ NP+TG+C ELPP
Sbjct: 109 PSLLQEESNQDCMPVAASGGLICYRKSSGNFIVTNPVTGSCRELPP 154


>ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 407

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/106 (54%), Positives = 81/106 (76%), Gaps = 4/106 (3%)
 Frame = +1

Query: 1   SFCRLRLVCKRWNSVATSATFKIACSQIPCRDPWFLMVGQELNQSIVFDTSEWKWRSISH 180
           SF RL  VCKRW S A S +FK+ACS++P RDPWFLMV   LNQSIVFDT+E  W+ ++H
Sbjct: 42  SFFRLTSVCKRWKSAAASVSFKLACSRVPLRDPWFLMVAPNLNQSIVFDTAENSWKRLNH 101

Query: 181 RNLLYRNT----VPVASSGGLICFQTISSDFVIGNPLTGACHELPP 306
            +L  +++    +PVA+SGGL+C++ +S +F++ NP+TG+C ELPP
Sbjct: 102 PHLPLKDSNISCMPVAASGGLVCYRKLSGNFIVCNPVTGSCTELPP 147


>ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/106 (54%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
 Frame = +1

Query: 1   SFCRLRLVCKRWNSVATSATFKIACSQIPCRDPWFLMVGQELNQSIVFDTSEWKWRSISH 180
           +F RL  VCKRW SVA SA+FK+ACS IP RDPWFLMV   LNQS++ D++E  W+ ++H
Sbjct: 49  TFFRLNSVCKRWKSVAASASFKLACSHIPSRDPWFLMVAPNLNQSVILDSAESTWKRLNH 108

Query: 181 RNLLY----RNTVPVASSGGLICFQTISSDFVIGNPLTGACHELPP 306
             LL     ++ VPVA+SGGLIC++  S +F++ NP+TG+C +LPP
Sbjct: 109 PPLLQEESNQDCVPVAASGGLICYRKSSGNFIVTNPVTGSCRKLPP 154


>ref|NP_001240018.1| uncharacterized protein LOC100801096 [Glycine max]
           gi|255638928|gb|ACU19766.1| unknown [Glycine max]
          Length = 407

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/106 (54%), Positives = 78/106 (73%), Gaps = 4/106 (3%)
 Frame = +1

Query: 1   SFCRLRLVCKRWNSVATSATFKIACSQIPCRDPWFLMVGQELNQSIVFDTSEWKWRSISH 180
           SF RL  VCKRW S A S +FK+ACS +P RDPWFLMV   LNQSIVFDT+E  W+ ++H
Sbjct: 42  SFFRLTSVCKRWKSAAASVSFKLACSHVPSRDPWFLMVAPNLNQSIVFDTAENSWKRLNH 101

Query: 181 RNLLYRNT----VPVASSGGLICFQTISSDFVIGNPLTGACHELPP 306
            +L   ++    +PVA+SGGL+C++ +  +FV+ NP+TG+C ELPP
Sbjct: 102 LHLPLEDSNISCMPVAASGGLVCYRKLLGNFVVCNPVTGSCSELPP 147


>ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucumis sativus]
           gi|449524430|ref|XP_004169226.1| PREDICTED: F-box only
           protein 13-like [Cucumis sativus]
          Length = 414

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/105 (56%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   SFCRLRLVCKRWNSVATSATFKIACSQIPCRDPWFLMVGQELNQSIVFDTSEWKWRSISH 180
           +F RL  VCKRW SVA S++FK ACS I  RDPWF MV   LN+SIVFD++E  W+ +++
Sbjct: 51  AFFRLSSVCKRWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNY 110

Query: 181 RNLL---YRNTVPVASSGGLICFQTISSDFVIGNPLTGACHELPP 306
            NLL   + +++PVA+SGGLICF+    +FV+ NPLTG+C ELPP
Sbjct: 111 PNLLQNHHLDSMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPP 155


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