BLASTX nr result
ID: Dioscorea21_contig00033284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00033284
(338 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi... 117 7e-25
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera] 117 1e-24
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi... 114 6e-24
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 117 bits (294), Expect = 7e-25
Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSG-FRPDNFTFPFVFKACGDVPLFKMGLQAHCKAF 161
N +I+ +V HF A+ +F MI SG F PD +TFP V KAC + + +G+ H +A
Sbjct: 152 NAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRAL 211
Query: 160 VSGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
VSGF SN VQN L+AMYMNCG+ + VF M RSVVSWNTMI+G FQNG
Sbjct: 212 VSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNG 264
Score = 60.8 bits (146), Expect = 1e-07
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFRPDNFTFPFVFKACGDVPLFKMGLQAHCKAFV 158
NT+I Q+ A+ +F+ M+ + PD+ T +CG + ++G++ H K
Sbjct: 254 NTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVH-KLVQ 312
Query: 157 SGFLSNEV-VQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
L ++ V+N L+ MY CG D S+VF + V++W +MI G NG
Sbjct: 313 KNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNG 365
>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
protein product [Vitis vinifera]
Length = 676
Score = 117 bits (292), Expect = 1e-24
Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFR-PDNFTFPFVFKACGDVPLFKMGLQAHCKAF 161
N +IR + S + A+ LF QM++SG R PDN+T+PFV KACGD L +MG H +
Sbjct: 91 NAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTV 150
Query: 160 VSGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
+SGF S+ VQN L+AMYMNCGE +V VF+ M R++VSWNTMI G F+NG
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203
Score = 62.4 bits (150), Expect = 4e-08
Identities = 36/112 (32%), Positives = 51/112 (45%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFRPDNFTFPFVFKACGDVPLFKMGLQAHCKAFV 158
NT+I + ++ A+ +F MI G PD T V C + ++G + H V
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252
Query: 157 SGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
+ V N L+ MY CG D ++F M R VVSW TM+ G NG
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG 304
>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 117 bits (292), Expect = 1e-24
Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFR-PDNFTFPFVFKACGDVPLFKMGLQAHCKAF 161
N +IR + S + A+ LF QM++SG R PDN+T+PFV KACGD L +MG H +
Sbjct: 91 NAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTV 150
Query: 160 VSGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
+SGF S+ VQN L+AMYMNCGE +V VF+ M R++VSWNTMI G F+NG
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203
Score = 62.4 bits (150), Expect = 4e-08
Identities = 36/112 (32%), Positives = 51/112 (45%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFRPDNFTFPFVFKACGDVPLFKMGLQAHCKAFV 158
NT+I + ++ A+ +F MI G PD T V C + ++G + H V
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252
Query: 157 SGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
+ V N L+ MY CG D ++F M R VVSW TM+ G NG
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG 304
>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 114 bits (286), Expect = 6e-24
Identities = 58/113 (51%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSG-FRPDNFTFPFVFKACGDVPLFKMGLQAHCKAF 161
N +I+ +V HF A+ +F MI SG PD +TFP V KAC + + +G+ H +A
Sbjct: 152 NAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRAL 211
Query: 160 VSGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
VSGF SN VQN L+AMYMNCG+ + VF M RSVVSWNTMI+G FQNG
Sbjct: 212 VSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNG 264
Score = 62.4 bits (150), Expect = 4e-08
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFRPDNFTFPFVFKACGDVPLFKMGLQAHCKAFV 158
NT+I Q+ A+ +F+ M+ + PD+ T +CG + ++G++ H K
Sbjct: 254 NTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVH-KLVQ 312
Query: 157 SGFLSNEV-VQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
L ++ V+N L+ MY CG D S+VF + V++W +MI G NG
Sbjct: 313 KNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNG 365
>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 109 bits (272), Expect = 3e-22
Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFR-PDNFTFPFVFKACGDVPLFKMGLQAHCKAF 161
N ++R +VQ F A++LF +M+ SG PD FT+P V KACGD+ L +G+ H + F
Sbjct: 81 NAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTF 140
Query: 160 VSGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQN 5
G+ S+ VQN L+AMYMN GEK+ +VF+ M R+V+SWNTMI G F+N
Sbjct: 141 KFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRN 192
Score = 71.6 bits (174), Expect = 6e-11
Identities = 36/112 (32%), Positives = 61/112 (54%)
Frame = -2
Query: 337 NTLIRAHVQSQHHFIAIHLFSQMISSGFRPDNFTFPFVFKACGDVPLFKMGLQAHCKAFV 158
NT+I + ++ A++++ +M+ G PD T V ACG + ++G + H
Sbjct: 183 NTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQE 242
Query: 157 SGFLSNEVVQNCLIAMYMNCGEKDVGSVVFEGMCNRSVVSWNTMIAGLFQNG 2
GF N VV+N L+ MY+ CG+ ++ +GM ++ VV+W T+I G NG
Sbjct: 243 KGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNG 294