BLASTX nr result

ID: Dioscorea21_contig00033271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033271
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   190   2e-46
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   183   3e-44
ref|XP_002512576.1| pentatricopeptide repeat-containing protein,...   182   7e-44
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   181   1e-43
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   181   1e-43

>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  190 bits (482), Expect = 2e-46
 Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 2/223 (0%)
 Frame = +3

Query: 3   PNYEFYENIIPLFCKADKIKEANKLFKTMKAEGYSPGVHLYGVIIHFLSGKLELDEAMEL 182
           P   FY   IPLFC+ D+++E  +LF+ MK   ++P   +YG +I  L  +L LDEA+ L
Sbjct: 266 PELSFYRTTIPLFCREDRLEEGIRLFRKMKESNFTPDSFIYGALIQCLCKQLRLDEAVNL 325

Query: 183 FEEMADVGVLPVTSIYVDIVSGYCKLGKLNEAMDFLIDSSVSEVEPYNTLLKGCCDMGRF 362
            EEM +  +    +++VD+V+G+CKLGK+NEA+  L D  V E  P+N LL+ CCD  +F
Sbjct: 326 LEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKLLEDKHVLETSPHNALLRCCCDADKF 385

Query: 363 PEAIDFLESMA--GMCDNLSWSILIRGLCEKGKLGNAFEILGRMIVSSYMPDQVTLSGII 536
             A   LE M+   + D  SW+ILIR LCE+ ++  A+E+LGRMI+SS +PD  T S ++
Sbjct: 386 LMAKGLLEKMSERNIDDCDSWNILIRWLCEREEMVKAYELLGRMIISSLIPDYATYSALV 445

Query: 537 IGCCRKRAYQSALDNFRLVRANNMSMDSESCSQLIEGLCHVNK 665
            G CR   Y+ AL  F  + A    +D  S S+LIEGLC   K
Sbjct: 446 AGNCRLSKYEDALQLFLQLHAKCWILDPASYSELIEGLCRGEK 488


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  183 bits (464), Expect = 3e-44
 Identities = 97/223 (43%), Positives = 135/223 (60%), Gaps = 2/223 (0%)
 Frame = +3

Query: 3   PNYEFYENIIPLFCKADKIKEANKLFKTMKAEGYSPGVHLYGVIIHFLSGKLELDEAMEL 182
           P   F+ + I LFC  D++++  +LF+ MK   ++P   +YG +I  L   L LDEA  L
Sbjct: 266 PELRFFRSTILLFCGEDRLQQGIRLFRKMKDSNFTPDPFIYGALIQCLCKHLRLDEAANL 325

Query: 183 FEEMADVGVLPVTSIYVDIVSGYCKLGKLNEAMDFLIDSSVSEVEPYNTLLKGCCDMGRF 362
            EEM +  + P  +++VDIV+G+CKLGK+NEA+  L D  V    P+N LL+ CCD  +F
Sbjct: 326 LEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKLLEDKHVHVTSPHNALLRCCCDADKF 385

Query: 363 PEAIDFLESMA--GMCDNLSWSILIRGLCEKGKLGNAFEILGRMIVSSYMPDQVTLSGII 536
             A   LE M+   + D  SW+ILIR LCEK  + NA+E+LGRMI+SS +PD  T S ++
Sbjct: 386 FMAKGLLEKMSERNIDDCDSWNILIRWLCEKVGVMNAYELLGRMIISSLIPDCATYSALV 445

Query: 537 IGCCRKRAYQSALDNFRLVRANNMSMDSESCSQLIEGLCHVNK 665
            G CR   Y+ AL  F  + A    +D  S S+LIEGLC   K
Sbjct: 446 AGNCRLSKYEDALQLFLQLHAKFWILDPASYSELIEGLCRGEK 488


>ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548537|gb|EEF50028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 739

 Score =  182 bits (461), Expect = 7e-44
 Identities = 96/223 (43%), Positives = 132/223 (59%), Gaps = 2/223 (0%)
 Frame = +3

Query: 3   PNYEFYENIIPLFCKADKIKEANKLFKTMKAEGYSPGVHLYGVIIHFLSGKLELDEAMEL 182
           P   FY  IIP  C+  K +EA +LF+ M+A  + P   +YG +I      L+LD+A+ L
Sbjct: 280 PELSFYTCIIPELCREHKSEEAIRLFRMMRASKFVPNSVIYGALIQCFCKNLQLDDAVNL 339

Query: 183 FEEMADVGVLPVTSIYVDIVSGYCKLGKLNEAMDFLIDSSVSEVEPYNTLLKGCCDMGRF 362
            EEM +  + P   + +D+V  +C+LGK NEA  FL D +V E  PYNTLL  CCD G+F
Sbjct: 340 LEEMVESCLTPDNDVVIDVVIAFCRLGKTNEAAKFLEDINVLETSPYNTLLGACCDAGKF 399

Query: 363 PEAIDFLESMA--GMCDNLSWSILIRGLCEKGKLGNAFEILGRMIVSSYMPDQVTLSGII 536
            EA   LE M+   + D  SW+ILIR LCEK  +  A E+LGRMI+SS +P++ T S ++
Sbjct: 400 IEAKGLLEKMSERSLADCDSWNILIRCLCEKAAIRKASELLGRMIISSLVPNRATYSALV 459

Query: 537 IGCCRKRAYQSALDNFRLVRANNMSMDSESCSQLIEGLCHVNK 665
           +G CR    + AL  F  +      +D  S S+LIEGLC   K
Sbjct: 460 LGHCRLNKCEDALQLFLQLCTKCWILDYVSYSELIEGLCEAGK 502


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  181 bits (458), Expect = 1e-43
 Identities = 96/221 (43%), Positives = 132/221 (59%), Gaps = 2/221 (0%)
 Frame = +3

Query: 15  FYENIIPLFCKADKIKEANKLFKTMKAEGYSPGVHLYGVIIHFLSGKLELDEAMELFEEM 194
           FY ++IPLFC   +++E   LF  M+A    P + +Y V+I  LS  L LD+A+ L EEM
Sbjct: 275 FYTSVIPLFCSVHQVEEGMMLFWRMRASKLVPDLLIYRVLIQCLSESLWLDDAINLLEEM 334

Query: 195 ADVGVLPVTSIYVDIVSGYCKLGKLNEAMDFLIDSSVSEVEPYNTLLKGCCDMGRFPEAI 374
              G+ P   ++V IV G+CKLGK NEA  FL D  V   +P+N LL+G C  G F  A 
Sbjct: 335 IGCGLTPEDDVFVYIVKGFCKLGKFNEAEFFLKDKCVFGTDPHNALLEGYCTAGDFHGAK 394

Query: 375 DFLESM--AGMCDNLSWSILIRGLCEKGKLGNAFEILGRMIVSSYMPDQVTLSGIIIGCC 548
            FLE +    + DN SW+IL+R LCE      AFE+L RMIVSS+ PD  T S ++IG C
Sbjct: 395 VFLEKIFDRNIIDNFSWNILVRWLCENAWTSKAFELLSRMIVSSFTPDSATYSALVIGNC 454

Query: 549 RKRAYQSALDNFRLVRANNMSMDSESCSQLIEGLCHVNKIQ 671
           +    +  L+ F  V + N  +DS S ++L+E LC + +IQ
Sbjct: 455 KLSKCKDGLELFHQVCSKNWVLDSASYAELVETLCQMERIQ 495


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  181 bits (458), Expect = 1e-43
 Identities = 96/221 (43%), Positives = 132/221 (59%), Gaps = 2/221 (0%)
 Frame = +3

Query: 15  FYENIIPLFCKADKIKEANKLFKTMKAEGYSPGVHLYGVIIHFLSGKLELDEAMELFEEM 194
           FY ++IPLFC   +++E   LF  M+A    P + +Y V+I  LS  L LD+A+ L EEM
Sbjct: 275 FYTSVIPLFCSVHQVEEGMMLFWRMRASKLVPDLLIYRVLIQCLSESLWLDDAINLLEEM 334

Query: 195 ADVGVLPVTSIYVDIVSGYCKLGKLNEAMDFLIDSSVSEVEPYNTLLKGCCDMGRFPEAI 374
              G+ P   ++V IV G+CKLGK NEA  FL D  V   +P+N LL+G C  G F  A 
Sbjct: 335 IGCGLTPEDDVFVYIVKGFCKLGKFNEAEFFLKDKCVFGTDPHNALLEGYCTAGDFHGAK 394

Query: 375 DFLESM--AGMCDNLSWSILIRGLCEKGKLGNAFEILGRMIVSSYMPDQVTLSGIIIGCC 548
            FLE +    + DN SW+IL+R LCE      AFE+L RMIVSS+ PD  T S ++IG C
Sbjct: 395 VFLEKIFDRNIIDNFSWNILVRWLCENAWTSKAFELLSRMIVSSFTPDSATYSALVIGNC 454

Query: 549 RKRAYQSALDNFRLVRANNMSMDSESCSQLIEGLCHVNKIQ 671
           +    +  L+ F  V + N  +DS S ++L+E LC + +IQ
Sbjct: 455 KLSKCKDGLELFHQVCSKNWVLDSASYAELVETLCQMERIQ 495


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