BLASTX nr result

ID: Dioscorea21_contig00033265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033265
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302555.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_004144990.1| PREDICTED: peroxisome biogenesis protein 16-...   147   1e-33
emb|CAZ96039.1| putative shrunken seed protein [Sorghum bicolor]      144   1e-32
ref|XP_002451428.1| hypothetical protein SORBIDRAFT_04g001930 [S...   144   1e-32
emb|CAZ96073.1| putative shrunken seed protein [Saccharum hybrid...   143   1e-32

>ref|XP_002302555.1| predicted protein [Populus trichocarpa] gi|222844281|gb|EEE81828.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  155 bits (393), Expect = 2e-36
 Identities = 84/171 (49%), Positives = 109/171 (63%), Gaps = 5/171 (2%)
 Frame = -2

Query: 500 DSGWKMLLEGGGTVNSEKSKDLRVTQGGIRRDGRPGENY--YGDIPPHLERRAMAALSRF 327
           +SG+KMLL GG T N EK  D   +Q  +    +PG  +   G  P +LE RA++ALSRF
Sbjct: 125 NSGYKMLLHGGETPNIEKHSDFSSSQHNVGGFPKPGSRHGPNGLNPWNLEGRALSALSRF 184

Query: 326 GENAKIASDPMWRQRLRQSY---EPPAEVVEKPTFSSIWFEKGLSSQLLLTGEVLSIMRP 156
           GENA+++SDP+W +R        EPP+  +E+PT S I  EKG+   L L GEVL I+RP
Sbjct: 185 GENARMSSDPVWLRRAGHQQAIMEPPSSAIERPTLSMILSEKGVQGALFLMGEVLFIIRP 244

Query: 155 LLYVLLIRKYGIRSWFPWAVSLGVDLTGISFLSFATNPKRTSKESCYQLSS 3
           L+YVL IRKYGIRSW PW VSL VD  G+ FL+  T  +   KE  Y L++
Sbjct: 245 LIYVLFIRKYGIRSWIPWFVSLAVDAGGVGFLTQVTKSRDGGKEQHYHLTA 295


>ref|XP_004144990.1| PREDICTED: peroxisome biogenesis protein 16-like [Cucumis sativus]
           gi|449471226|ref|XP_004153246.1| PREDICTED: peroxisome
           biogenesis protein 16-like [Cucumis sativus]
           gi|449522488|ref|XP_004168258.1| PREDICTED: peroxisome
           biogenesis protein 16-like [Cucumis sativus]
          Length = 369

 Score =  147 bits (370), Expect = 1e-33
 Identities = 82/171 (47%), Positives = 108/171 (63%), Gaps = 12/171 (7%)
 Frame = -2

Query: 500 DSGWKMLLEGGGTVNSEKSKDLRVTQ---------GGIRRDGRPGENYYGDIPPHLERRA 348
           +SG+K+LLEGG T NSE+  +   +          GG    G  G+   G  P +LE RA
Sbjct: 125 NSGYKILLEGGETTNSERHLETSTSHHKANAFTKHGGHHASGFSGD-LNGHSPWNLEGRA 183

Query: 347 MAALSRFGENAKIASDPMWRQRLRQSY---EPPAEVVEKPTFSSIWFEKGLSSQLLLTGE 177
           ++ALSRFGENA++ S P W  R++  +    PPA + E+PT S+I  E+G    L +TGE
Sbjct: 184 LSALSRFGENARMTSPPAWSYRVQHQHAILNPPATIPERPTLSTILSEQGHRGALFITGE 243

Query: 176 VLSIMRPLLYVLLIRKYGIRSWFPWAVSLGVDLTGISFLSFATNPKRTSKE 24
           VL I RPL+YVLLIRKYG RSW PW +SL VDL G SFLS+AT+   + K+
Sbjct: 244 VLFIARPLIYVLLIRKYGSRSWTPWFLSLAVDLLGTSFLSYATSASASRKD 294


>emb|CAZ96039.1| putative shrunken seed protein [Sorghum bicolor]
          Length = 361

 Score =  144 bits (362), Expect = 1e-32
 Identities = 79/171 (46%), Positives = 105/171 (61%), Gaps = 19/171 (11%)
 Frame = -2

Query: 500 DSGWKMLLEGGGTVNSEKSKDLRVTQGGIRRDGRPG-------------------ENYYG 378
           +SG+KMLL+GG   N E+   L     G+  +G P                    +   G
Sbjct: 124 ESGYKMLLQGGEVANEEEVTVLE-NNYGVNGNGVPAIYPMDRHSGNGHKGMTKGLDGKNG 182

Query: 377 DIPPHLERRAMAALSRFGENAKIASDPMWRQRLRQSYEPPAEVVEKPTFSSIWFEKGLSS 198
            +   LE+RA+AAL++FGENAK+ SDPMW QRL+ + EP   VVEKPT +SIW  KG + 
Sbjct: 183 FVSKSLEKRAVAALNKFGENAKMMSDPMWMQRLQPTPEPTVMVVEKPTLASIWSAKGGTG 242

Query: 197 QLLLTGEVLSIMRPLLYVLLIRKYGIRSWFPWAVSLGVDLTGISFLSFATN 45
           +L + GEV+ I RPL+YVLLIRK+GI+SW PW VSL V+LT +   S AT+
Sbjct: 243 RLFVLGEVVHIFRPLVYVLLIRKFGIKSWTPWLVSLAVELTSLGIHSHATD 293


>ref|XP_002451428.1| hypothetical protein SORBIDRAFT_04g001930 [Sorghum bicolor]
           gi|241931259|gb|EES04404.1| hypothetical protein
           SORBIDRAFT_04g001930 [Sorghum bicolor]
          Length = 374

 Score =  144 bits (362), Expect = 1e-32
 Identities = 79/171 (46%), Positives = 105/171 (61%), Gaps = 19/171 (11%)
 Frame = -2

Query: 500 DSGWKMLLEGGGTVNSEKSKDLRVTQGGIRRDGRPG-------------------ENYYG 378
           +SG+KMLL+GG   N E+   L     G+  +G P                    +   G
Sbjct: 124 ESGYKMLLQGGEVANEEEVTVLE-NNYGVNGNGVPAIYPMDRHSGNGHKGMTKGLDGKNG 182

Query: 377 DIPPHLERRAMAALSRFGENAKIASDPMWRQRLRQSYEPPAEVVEKPTFSSIWFEKGLSS 198
            +   LE+RA+AAL++FGENAK+ SDPMW QRL+ + EP   VVEKPT +SIW  KG + 
Sbjct: 183 FVSKSLEKRAVAALNKFGENAKMMSDPMWMQRLQPTPEPTVMVVEKPTLASIWSAKGGTG 242

Query: 197 QLLLTGEVLSIMRPLLYVLLIRKYGIRSWFPWAVSLGVDLTGISFLSFATN 45
           +L + GEV+ I RPL+YVLLIRK+GI+SW PW VSL V+LT +   S AT+
Sbjct: 243 RLFVLGEVVHIFRPLVYVLLIRKFGIKSWTPWLVSLAVELTSLGIHSHATD 293


>emb|CAZ96073.1| putative shrunken seed protein [Saccharum hybrid cultivar R570]
          Length = 363

 Score =  143 bits (361), Expect = 1e-32
 Identities = 79/170 (46%), Positives = 105/170 (61%), Gaps = 18/170 (10%)
 Frame = -2

Query: 500 DSGWKMLLEGGGTVNSEKSKDLRVTQG----GIRR----DGRPGENYY----------GD 375
           +SG+KMLL+GG   N E+   L    G    G+      DG  G  +           G 
Sbjct: 124 ESGYKMLLQGGEVANEEEVTVLENNYGVNGNGVPAIYPMDGHAGNGHKATTKGLDGKNGF 183

Query: 374 IPPHLERRAMAALSRFGENAKIASDPMWRQRLRQSYEPPAEVVEKPTFSSIWFEKGLSSQ 195
           +   LE+RA+AAL++FGENAK+ SDPMW +RL+ + EP   V EKPT +SIWF KG + +
Sbjct: 184 VSKSLEKRAVAALNKFGENAKMMSDPMWMRRLQPTPEPTVMVAEKPTLASIWFAKGGTGR 243

Query: 194 LLLTGEVLSIMRPLLYVLLIRKYGIRSWFPWAVSLGVDLTGISFLSFATN 45
           L + GEV+ I RPL+YVLLIRK+GI+SW PW VSL V+LT +   S  T+
Sbjct: 244 LFVLGEVVHIFRPLVYVLLIRKFGIKSWTPWLVSLAVELTSLGIHSHVTD 293


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