BLASTX nr result

ID: Dioscorea21_contig00033241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033241
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|2...   224   7e-57
ref|XP_002533285.1| conserved hypothetical protein [Ricinus comm...   222   5e-56
ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...   221   6e-56
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...   221   8e-56
ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Gly...   219   2e-55

>ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|222850416|gb|EEE87963.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  224 bits (572), Expect = 7e-57
 Identities = 110/205 (53%), Positives = 148/205 (72%)
 Frame = -1

Query: 620 SSTARITAHVEEMQERTILDLPELALDCILEKLSPVGLCNMAGVCHALRDRCASDHLWKR 441
           S+ A  +A  +E    ++LDLPELAL+C+LE+L P GLC+MAGVC +LR+RC SDHLW++
Sbjct: 78  SARAEKSALDDETGGMSVLDLPELALECVLERLPPAGLCSMAGVCTSLRERCVSDHLWEK 137

Query: 440 HMREKWGRVFAFAANKDFSLYLPSRRVEVSSDKDKSLAQPEGCIGSLSHLWPLSWFKPRT 261
           HM+ KWGRV   AA +++  +L SR+ ++ S K     +P+G +  LS  WP SW  P+ 
Sbjct: 138 HMKHKWGRVIGPAAYREWQWHLASRK-DLGSCKQ---GKPKGLMRLLSIFWPSSWSTPKV 193

Query: 260 DGGGNNKXXXXXSTALPVDSIMSCYLSLQSGRIWFPAQVYNRENGSVGFLLSCYDAELSY 81
           D   N++      ++LPV SIMS YL+L++G+ WFPAQV+NRENG VGF+LSCYDAEL+Y
Sbjct: 194 DPVNNSRQR----SSLPVHSIMSWYLALETGKFWFPAQVFNRENGHVGFMLSCYDAELNY 249

Query: 80  DTRTDSFYARYPPHGVRTTNIEDGV 6
           D RTD+F ARYPPHG R  +IE GV
Sbjct: 250 DPRTDTFQARYPPHGRRAISIESGV 274


>ref|XP_002533285.1| conserved hypothetical protein [Ricinus communis]
           gi|223526888|gb|EEF29096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  222 bits (565), Expect = 5e-56
 Identities = 109/198 (55%), Positives = 141/198 (71%)
 Frame = -1

Query: 599 AHVEEMQERTILDLPELALDCILEKLSPVGLCNMAGVCHALRDRCASDHLWKRHMREKWG 420
           A  +E+ E ++LDLPELAL+CILEKL P GLC+MAGVC +LR RC SDHLW+RHM++KWG
Sbjct: 88  AEDDEISEVSVLDLPELALECILEKLPPKGLCSMAGVCTSLRQRCLSDHLWERHMKQKWG 147

Query: 419 RVFAFAANKDFSLYLPSRRVEVSSDKDKSLAQPEGCIGSLSHLWPLSWFKPRTDGGGNNK 240
           ++   AA +++  ++ SR    +  + K     +G +  LS +WP SW  P+ D      
Sbjct: 148 KIIGPAAYREWQFHIASRNDFGTCKQGKQ----KGLMKLLSIVWPPSWIIPKDDCN---- 199

Query: 239 XXXXXSTALPVDSIMSCYLSLQSGRIWFPAQVYNRENGSVGFLLSCYDAELSYDTRTDSF 60
                 ++LPVDSIMS YL+L++GR WFPAQVYNRENG VGF+LSCYDA+LSYD R D+F
Sbjct: 200 IFIKQRSSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDADLSYDPRKDTF 259

Query: 59  YARYPPHGVRTTNIEDGV 6
            ARYPPHG R T IE+GV
Sbjct: 260 QARYPPHGRRATAIENGV 277


>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score =  221 bits (564), Expect = 6e-56
 Identities = 113/203 (55%), Positives = 141/203 (69%), Gaps = 2/203 (0%)
 Frame = -1

Query: 605 ITAHVEEMQERTILDLPELALDCILEKLSPVGLCNMAGVCHALRDRCASDHLWKRHMREK 426
           I  +VEE  E ++LDLPELAL+CILEKL P  LC+MAGVC +LR+RC SDHLW++HM+ K
Sbjct: 47  IYKNVEESGEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRK 106

Query: 425 WGRVFAFAANKDFSLYLPSRRVE--VSSDKDKSLAQPEGCIGSLSHLWPLSWFKPRTDGG 252
           WG+V   AA +++  +L SR  E  +  +K KSL      I   S  W LSW + + +  
Sbjct: 107 WGKVIGQAAYREWQWHLASRAGESNLKQNKQKSL------IRLFSFGWSLSWIRSKVNEN 160

Query: 251 GNNKXXXXXSTALPVDSIMSCYLSLQSGRIWFPAQVYNRENGSVGFLLSCYDAELSYDTR 72
            N        T LPVDSIM+ YL+L++GR WFPAQVYNRENG VGF+LSCYDAEL YD R
Sbjct: 161 SNTPR-----TFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELCYDLR 215

Query: 71  TDSFYARYPPHGVRTTNIEDGVK 3
           TD+F ARYPPHG R   IE+GV+
Sbjct: 216 TDTFQARYPPHGRRAIAIENGVQ 238


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score =  221 bits (563), Expect = 8e-56
 Identities = 112/200 (56%), Positives = 140/200 (70%), Gaps = 2/200 (1%)
 Frame = -1

Query: 596 HVEEMQERTILDLPELALDCILEKLSPVGLCNMAGVCHALRDRCASDHLWKRHMREKWGR 417
           +VEE  E ++LDLPELAL+CILEKL P  LC+MAGVC +LR+RC SDHLW++HM+ KWG+
Sbjct: 78  NVEESGEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKWGK 137

Query: 416 VFAFAANKDFSLYLPSRRVE--VSSDKDKSLAQPEGCIGSLSHLWPLSWFKPRTDGGGNN 243
           V   AA +++  +L SR  E  +  +K KSL      I   S  W LSW + + +   N 
Sbjct: 138 VIGQAAYREWQWHLASRAGESNLKQNKQKSL------IRLFSFGWSLSWIRSKVNENSNT 191

Query: 242 KXXXXXSTALPVDSIMSCYLSLQSGRIWFPAQVYNRENGSVGFLLSCYDAELSYDTRTDS 63
                  T LPVDSIM+ YL+L++GR WFPAQVYNRENG VGF+LSCYDAEL YD RTD+
Sbjct: 192 PR-----TFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELCYDLRTDT 246

Query: 62  FYARYPPHGVRTTNIEDGVK 3
           F ARYPPHG R   IE+GV+
Sbjct: 247 FQARYPPHGRRAIAIENGVQ 266


>ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score =  219 bits (559), Expect = 2e-55
 Identities = 109/206 (52%), Positives = 143/206 (69%)
 Frame = -1

Query: 623 RSSTARITAHVEEMQERTILDLPELALDCILEKLSPVGLCNMAGVCHALRDRCASDHLWK 444
           +S T+R+  +VEE  + ++LDLPELALDCILE+L P  LC +A VC  LR+RC SDHLW+
Sbjct: 71  KSLTSRVE-NVEESLDMSVLDLPELALDCILERLPPSSLCRIAAVCRTLRERCVSDHLWE 129

Query: 443 RHMREKWGRVFAFAANKDFSLYLPSRRVEVSSDKDKSLAQPEGCIGSLSHLWPLSWFKPR 264
           +HMR+KWGRV   AA +++  ++ S+R  V   K     + +G +  +S  WP  W +P+
Sbjct: 130 KHMRKKWGRVIGPAAYREWKWHVASKR-NVGGLKH---GRQKGLMRFMSLHWPFQWIRPK 185

Query: 263 TDGGGNNKXXXXXSTALPVDSIMSCYLSLQSGRIWFPAQVYNRENGSVGFLLSCYDAELS 84
            D   NN       ++LPVDS+M+ YL+L+SG  WFPAQVYNRENG VGF+LSCYDAELS
Sbjct: 186 VDANYNNPKLR---SSLPVDSVMNWYLALESGNFWFPAQVYNRENGHVGFMLSCYDAELS 242

Query: 83  YDTRTDSFYARYPPHGVRTTNIEDGV 6
           YD RTD+F ARYPPHG R    E G+
Sbjct: 243 YDPRTDTFQARYPPHGRRADARECGI 268


Top