BLASTX nr result

ID: Dioscorea21_contig00033227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033227
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522834.1| breast carcinoma amplified sequence, putativ...    55   8e-06

>ref|XP_002522834.1| breast carcinoma amplified sequence, putative [Ricinus communis]
           gi|223537918|gb|EEF39532.1| breast carcinoma amplified
           sequence, putative [Ricinus communis]
          Length = 891

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/83 (39%), Positives = 44/83 (53%)
 Frame = +2

Query: 8   TANSNRTDLIYKVSVDCPNSSCSSRVDQQGLHPSGFPVTLSAVSRLRNGVNDWKNXXXXX 187
           +A ++ + ++ K +V  P+S      +QQ L  SG PVTLS VSR+RNG N WK      
Sbjct: 487 SAKNSESGVMTKSAVRWPSSLGLQMHNQQSLCASGPPVTLSVVSRIRNGNNGWKGSVTGA 546

Query: 188 XXXXXXXXXPLSGPMASVFHNRK 256
                     LSG +AS FHN K
Sbjct: 547 AAAATGRLSSLSGAIASSFHNCK 569


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