BLASTX nr result

ID: Dioscorea21_contig00033206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033206
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric...    89   3e-16
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243...    89   5e-16
emb|CBI20080.3| unnamed protein product [Vitis vinifera]               89   5e-16
emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]    89   5e-16
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
           gi|223550173|gb|EEF51660.1| tyrosyl-DNA
           phosphodiesterase, putative [Ricinus communis]
          Length = 1148

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = -2

Query: 212 CNSNGKKLFLNKLDLVGCDMADQGNVVSLPELFNPVESLVRVFAATFTSDIPWFLSSCRL 33
           C   GKK +LN+L  +        NVVSLPEL +P+E+++R+F ATFTSDI WFLS C +
Sbjct: 420 CQLPGKKFYLNRLHFMEHGSFSHQNVVSLPELLHPIENIMRIFIATFTSDILWFLSYCEI 479

Query: 32  PSHLPITIAC 3
           PSHLP+TIAC
Sbjct: 480 PSHLPVTIAC 489


>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
          Length = 1091

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -2

Query: 215 SCNSNGKKLFLNKLDLVGCDMADQGNVVSLPELFNPVESLVRVFAATFTSDIPWFLSSCR 36
           SC   GKK +LN+L+ +    +    V+SLPEL  PVE+L R+F ATFTSD+ WFLS C+
Sbjct: 363 SCPPPGKKFYLNRLEFMNYSSSGNHTVISLPELLFPVENLSRIFVATFTSDVLWFLSYCK 422

Query: 35  LPSHLPITIAC 3
           +P HLP+TIAC
Sbjct: 423 VPGHLPVTIAC 433


>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -2

Query: 215 SCNSNGKKLFLNKLDLVGCDMADQGNVVSLPELFNPVESLVRVFAATFTSDIPWFLSSCR 36
           SC   GKK +LN+L+ +    +    V+SLPEL  PVE+L R+F ATFTSD+ WFLS C+
Sbjct: 323 SCPPPGKKFYLNRLEFMNYSSSGNHTVISLPELLFPVENLSRIFVATFTSDVLWFLSYCK 382

Query: 35  LPSHLPITIAC 3
           +P HLP+TIAC
Sbjct: 383 VPGHLPVTIAC 393


>emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]
          Length = 1423

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -2

Query: 215 SCNSNGKKLFLNKLDLVGCDMADQGNVVSLPELFNPVESLVRVFAATFTSDIPWFLSSCR 36
           SC   GKK +LN+L+ +    +    V+SLPEL  PVE+L R+F ATFTSD+ WFLS C+
Sbjct: 367 SCPPPGKKFYLNRLEFMNYSSSGNHTVISLPELLFPVENLSRIFVATFTSDVLWFLSYCK 426

Query: 35  LPSHLPITIAC 3
           +P HLP+TIAC
Sbjct: 427 VPGHLPVTIAC 437


>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
           predicted protein [Populus trichocarpa]
          Length = 1131

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = -2

Query: 221 WRSC-NSNGKKLFLNKLDLVGCDMADQGNVVSLPELFNPVESLVRVFAATFTSDIPWFLS 45
           W++C    GKK +LN+L  +        NV+SLPEL  PVES+ R+F ATFTSDI WFLS
Sbjct: 414 WKNCCPPPGKKFYLNRLQFMDHGSFTHPNVISLPELLYPVESISRIFIATFTSDILWFLS 473

Query: 44  SCRLPSHLPITIAC 3
            C +P HLP+TIAC
Sbjct: 474 HCEIPCHLPVTIAC 487


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