BLASTX nr result
ID: Dioscorea21_contig00033205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00033205
(676 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 192 4e-47
emb|CBI26017.3| unnamed protein product [Vitis vinifera] 191 1e-46
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 191 1e-46
emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera] 190 2e-46
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 185 8e-45
>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
Length = 327
Score = 192 bits (489), Expect = 4e-47
Identities = 90/111 (81%), Positives = 97/111 (87%)
Frame = +1
Query: 1 VHAWGQVAHFVTPFTYDSLESLHAAVNGLLPHEIRVREISPTCPEFHARFSTKSKIYHYK 180
VHAWGQVAHF TPF YD+LE LHAA+NGLLP +IR+REISP EFHARFS KSKIYHYK
Sbjct: 100 VHAWGQVAHFFTPFNYDNLEQLHAALNGLLPTDIRIREISPASAEFHARFSAKSKIYHYK 159
Query: 181 IYNHAIMDPFQCQYAYHSVYKLNPEVMREAALHFVGKHDFSSFANASHNDR 333
IYN AIMDPFQ +AYHSVYKLN VMREAA +FVGKHDFS+FANASHNDR
Sbjct: 160 IYNDAIMDPFQRHFAYHSVYKLNSAVMREAATYFVGKHDFSAFANASHNDR 210
Score = 52.0 bits (123), Expect(2) = 4e-11
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = +2
Query: 542 ALLLQIGREALPPDIIPEIXXXXXXXXXXXXXXXXPPHGLCLMSI 676
ALLLQIGREA+PPDI+P I PPHGLCL+SI
Sbjct: 249 ALLLQIGREAIPPDIVPHILASRDRKELAKYSLPAPPHGLCLVSI 293
Score = 41.6 bits (96), Expect(2) = 4e-11
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 474 EMGHILQLEVDGTGFLFRQVRNM 542
EMG +LQLEV+G+GFL+RQVRNM
Sbjct: 225 EMGALLQLEVEGSGFLYRQVRNM 247
>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
Length = 326
Score = 191 bits (484), Expect = 1e-46
Identities = 88/111 (79%), Positives = 94/111 (84%)
Frame = +1
Query: 1 VHAWGQVAHFVTPFTYDSLESLHAAVNGLLPHEIRVREISPTCPEFHARFSTKSKIYHYK 180
VHAWGQVAHF+TPF YD LES+HAA+NGLLP +IRVREISP PEFHARFS KSKIYHYK
Sbjct: 101 VHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYK 160
Query: 181 IYNHAIMDPFQCQYAYHSVYKLNPEVMREAALHFVGKHDFSSFANASHNDR 333
IYN A+MDPF Y YHSVYKLN MREAA HF GKHDFS+F NASHNDR
Sbjct: 161 IYNDAVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDR 211
Score = 50.1 bits (118), Expect(2) = 1e-10
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = +2
Query: 542 ALLLQIGREALPPDIIPEIXXXXXXXXXXXXXXXXPPHGLCLMSI 676
ALLLQIGREA+PP+I+P I PPHGLCLMS+
Sbjct: 250 ALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSV 294
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 474 EMGHILQLEVDGTGFLFRQVRNM 542
EMG +LQLEV+G+GFL+RQVRNM
Sbjct: 226 EMGALLQLEVEGSGFLYRQVRNM 248
>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
Length = 336
Score = 191 bits (484), Expect = 1e-46
Identities = 88/111 (79%), Positives = 94/111 (84%)
Frame = +1
Query: 1 VHAWGQVAHFVTPFTYDSLESLHAAVNGLLPHEIRVREISPTCPEFHARFSTKSKIYHYK 180
VHAWGQVAHF+TPF YD LES+HAA+NGLLP +IRVREISP PEFHARFS KSKIYHYK
Sbjct: 111 VHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYK 170
Query: 181 IYNHAIMDPFQCQYAYHSVYKLNPEVMREAALHFVGKHDFSSFANASHNDR 333
IYN A+MDPF Y YHSVYKLN MREAA HF GKHDFS+F NASHNDR
Sbjct: 171 IYNDAVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDR 221
Score = 50.1 bits (118), Expect(2) = 1e-10
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = +2
Query: 542 ALLLQIGREALPPDIIPEIXXXXXXXXXXXXXXXXPPHGLCLMSI 676
ALLLQIGREA+PP+I+P I PPHGLCLMS+
Sbjct: 260 ALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSV 304
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 474 EMGHILQLEVDGTGFLFRQVRNM 542
EMG +LQLEV+G+GFL+RQVRNM
Sbjct: 236 EMGALLQLEVEGSGFLYRQVRNM 258
>emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]
Length = 403
Score = 190 bits (483), Expect = 2e-46
Identities = 88/111 (79%), Positives = 94/111 (84%)
Frame = +1
Query: 1 VHAWGQVAHFVTPFTYDSLESLHAAVNGLLPHEIRVREISPTCPEFHARFSTKSKIYHYK 180
VHAWGQVAHF+TPF YD LES+HAA+NGLLP +IRVREISP PEFHARFS KSKIYHYK
Sbjct: 165 VHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSXKSKIYHYK 224
Query: 181 IYNHAIMDPFQCQYAYHSVYKLNPEVMREAALHFVGKHDFSSFANASHNDR 333
IYN A+MDPF Y YHSVYKLN MREAA HF GKHDFS+F NASHNDR
Sbjct: 225 IYNDAVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDR 275
Score = 50.1 bits (118), Expect(2) = 2e-09
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = +2
Query: 542 ALLLQIGREALPPDIIPEIXXXXXXXXXXXXXXXXPPHGLCLMSI 676
ALLLQIGREA+PP+I+P I PPHGLCLMS+
Sbjct: 327 ALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSV 371
Score = 37.7 bits (86), Expect(2) = 2e-09
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 480 GHILQLEVDGTGFLFRQVRNM 542
G +LQLEV+G+GFL+RQVRNM
Sbjct: 305 GALLQLEVEGSGFLYRQVRNM 325
>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
Length = 309
Score = 185 bits (469), Expect = 8e-45
Identities = 88/110 (80%), Positives = 95/110 (86%)
Frame = +1
Query: 1 VHAWGQVAHFVTPFTYDSLESLHAAVNGLLPHEIRVREISPTCPEFHARFSTKSKIYHYK 180
VHAWGQVAHF TPF YD+LE LHAA+NGLLP +IRVREISP EFHARFS SKIYHYK
Sbjct: 82 VHAWGQVAHFFTPFNYDNLEELHAALNGLLPTDIRVREISPASAEFHARFSAISKIYHYK 141
Query: 181 IYNHAIMDPFQCQYAYHSVYKLNPEVMREAALHFVGKHDFSSFANASHND 330
IYN AIMDPFQ +AYHSVYKLN VMREAA +FVGKHDFS+FANAS+ND
Sbjct: 142 IYNDAIMDPFQRHFAYHSVYKLNSAVMREAAKYFVGKHDFSAFANASNND 191
Score = 52.0 bits (123), Expect(2) = 6e-11
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = +2
Query: 542 ALLLQIGREALPPDIIPEIXXXXXXXXXXXXXXXXPPHGLCLMSI 676
ALLLQIGREA+PPDI+P I PPHGLCL+SI
Sbjct: 231 ALLLQIGREAIPPDIVPHILASRDRKELAKYSLSAPPHGLCLVSI 275
Score = 40.8 bits (94), Expect(2) = 6e-11
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +3
Query: 474 EMGHILQLEVDGTGFLFRQVRNM 542
EMG +LQ+EV+G+GFL+RQVRNM
Sbjct: 207 EMGALLQIEVEGSGFLYRQVRNM 229