BLASTX nr result

ID: Dioscorea21_contig00033185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033185
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278559.1| PREDICTED: putative expansin-B2 [Vitis vinif...   224   9e-57
gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum]          218   9e-55
ref|XP_002511649.1| Beta-expansin 3 precursor, putative [Ricinus...   216   2e-54
ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicu...   216   3e-54
ref|XP_002320708.1| hypothetical protein POPTRDRAFT_572072 [Popu...   214   1e-53

>ref|XP_002278559.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297734537|emb|CBI16588.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  224 bits (571), Expect = 9e-57
 Identities = 116/191 (60%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
 Frame = -2

Query: 569 KLLNYTSHVSSSGWSRAGATWFGDPNXXXXXXXXXXXXXAVAISPFSSFVSAGNPFLYKS 390
           KLLN++   S + WS AGATW+G  N             AV  +PFS+ VSAG P L+KS
Sbjct: 32  KLLNFSKLQSDTDWSPAGATWYGPANGAGSDGGACGYEDAVEKAPFSAKVSAGGPSLFKS 91

Query: 389 GMGCGACYQVKCTANEACSGKPVTVVITDECPG--DEQVHFDLSGTALGAMAKSGMAEQL 216
           G GCGACYQVKCT NEACSG PVTV ITDECPG   E  HFDLSGTA GAMAKSG  +QL
Sbjct: 92  GKGCGACYQVKCTGNEACSGSPVTVTITDECPGCVSESTHFDLSGTAFGAMAKSGQDDQL 151

Query: 215 RNAGKLPIEFTRVECNYPGTNIAFRVDPGSNSQYLAVVIEYEDGQGDLSAVELKQAPAKT 36
           RNAG L I++ RVEC YPGT++ F VD GSNS Y A +IEYEDG GDL+ V L+QA    
Sbjct: 152 RNAGVLQIQYRRVECEYPGTSVVFHVDSGSNSNYFASLIEYEDGDGDLARVYLQQA---- 207

Query: 35  SASDNWVHMDQ 3
             SD WV M Q
Sbjct: 208 LDSDMWVPMQQ 218


>gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum]
          Length = 276

 Score =  218 bits (554), Expect = 9e-55
 Identities = 111/196 (56%), Positives = 132/196 (67%), Gaps = 5/196 (2%)
 Frame = -2

Query: 575 NPKLLNYTSHV-SSSGWSRAGATWFGDPNXXXXXXXXXXXXXAVAISPFSSFVSAGNPFL 399
           +PK LN  S + S+S WS AGATW+G P+             AV   PFSS ++A  P L
Sbjct: 31  HPKRLNNVSKIQSNSDWSPAGATWYGSPSGAGSDGGACGYTNAVDQPPFSSLIAAAGPSL 90

Query: 398 YKSGMGCGACYQVKCTANEACSGKPVTVVITDECPG----DEQVHFDLSGTALGAMAKSG 231
           +KSG GCGACYQVKCT N+ACSGKPV VVITD CPG     E  HFDLSGT+ GAMA SG
Sbjct: 91  FKSGKGCGACYQVKCTGNKACSGKPVRVVITDSCPGGPCLSESAHFDLSGTSFGAMAISG 150

Query: 230 MAEQLRNAGKLPIEFTRVECNYPGTNIAFRVDPGSNSQYLAVVIEYEDGQGDLSAVELKQ 51
            A+QLRNAG L +++ RVECNYPG  + F VD GSNS Y A ++EYEDG GDL+ V+LKQ
Sbjct: 151 QADQLRNAGVLQVQYKRVECNYPGVKLTFHVDSGSNSNYFAALVEYEDGDGDLNRVDLKQ 210

Query: 50  APAKTSASDNWVHMDQ 3
           A      S++W  M Q
Sbjct: 211 A----LDSESWQPMQQ 222


>ref|XP_002511649.1| Beta-expansin 3 precursor, putative [Ricinus communis]
           gi|223548829|gb|EEF50318.1| Beta-expansin 3 precursor,
           putative [Ricinus communis]
          Length = 272

 Score =  216 bits (551), Expect = 2e-54
 Identities = 109/182 (59%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
 Frame = -2

Query: 536 SGWSRAGATWFGDPNXXXXXXXXXXXXXAVAISPFSSFVSAGNPFLYKSGMGCGACYQVK 357
           SGW+ AGATW+G P              AV   PFSS ++AG P LYKSG GCGACYQVK
Sbjct: 41  SGWAPAGATWYGSPTGAGSDGGACGYQNAVDQPPFSSMIAAGGPSLYKSGKGCGACYQVK 100

Query: 356 CTANEACSGKPVTVVITDECPGD----EQVHFDLSGTALGAMAKSGMAEQLRNAGKLPIE 189
           CT++ ACSGKP TVVITDECPG     E VHFDLSGTA GAMA SG A+QLRNAG L I 
Sbjct: 101 CTSHSACSGKPATVVITDECPGGPCTAESVHFDLSGTAFGAMAISGGADQLRNAGVLQIR 160

Query: 188 FTRVECNYPGTNIAFRVDPGSNSQYLAVVIEYEDGQGDLSAVELKQAPAKTSASDNWVHM 9
           + RV+CNYPG ++ F VD GSN  Y A ++EYEDG G+L +VELKQA  K    D+W  M
Sbjct: 161 YRRVQCNYPGRSVVFHVDSGSNPYYFATLVEYEDGDGELRSVELKQALDK---EDSWAPM 217

Query: 8   DQ 3
            Q
Sbjct: 218 QQ 219


>ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicum]
           gi|82569705|gb|ABB83474.1| beta-expansin precursor
           [Solanum lycopersicum]
          Length = 275

 Score =  216 bits (549), Expect = 3e-54
 Identities = 108/195 (55%), Positives = 130/195 (66%), Gaps = 4/195 (2%)
 Frame = -2

Query: 575 NPKLLNYTSHVSSSGWSRAGATWFGDPNXXXXXXXXXXXXXAVAISPFSSFVSAGNPFLY 396
           +PK  N +   S+S WS  GATW+G P+             AV   PFSS ++A  P L+
Sbjct: 31  HPKRFNVSKVQSNSDWSPPGATWYGSPSGAGSDGGACGYTNAVDQPPFSSLIAAAGPSLF 90

Query: 395 KSGMGCGACYQVKCTANEACSGKPVTVVITDECPG----DEQVHFDLSGTALGAMAKSGM 228
           KSG GCGACYQVKCT N+ACSGKPV VVITD CPG     E  HFDLSGT+ GAMA SG 
Sbjct: 91  KSGKGCGACYQVKCTGNKACSGKPVRVVITDSCPGGPCLSESAHFDLSGTSFGAMAISGQ 150

Query: 227 AEQLRNAGKLPIEFTRVECNYPGTNIAFRVDPGSNSQYLAVVIEYEDGQGDLSAVELKQA 48
           A+QLRNAG + I++ RVECNYPG  + F VD GSNS Y A ++EYEDG GDL++V+LKQA
Sbjct: 151 ADQLRNAGVIQIQYKRVECNYPGVKLTFHVDSGSNSNYFAALVEYEDGDGDLNSVDLKQA 210

Query: 47  PAKTSASDNWVHMDQ 3
                 S++W  M Q
Sbjct: 211 ----LDSESWQPMQQ 221


>ref|XP_002320708.1| hypothetical protein POPTRDRAFT_572072 [Populus trichocarpa]
           gi|222861481|gb|EEE99023.1| hypothetical protein
           POPTRDRAFT_572072 [Populus trichocarpa]
          Length = 274

 Score =  214 bits (545), Expect = 1e-53
 Identities = 112/197 (56%), Positives = 130/197 (65%), Gaps = 6/197 (3%)
 Frame = -2

Query: 575 NPKLLNYTSHVSSSGWSRAGATWFGDPNXXXXXXXXXXXXXAVAISPFSSFVSAGNPFLY 396
           +PKL N +   S+S WS AGATW+G P              AV  +PFSSF+SAG   +Y
Sbjct: 28  HPKLFNVSKIQSNSDWSPAGATWYGSPTGAGSDGGACGYGNAVEQAPFSSFISAGGDSIY 87

Query: 395 KSGMGCGACYQVKCTA--NEACSGKPVTVVITDECPGD----EQVHFDLSGTALGAMAKS 234
           KSG GCGACYQVKCT+  N ACSG PVTVVITD+CPG     E  HFDLSGTA GAMA S
Sbjct: 88  KSGQGCGACYQVKCTSSSNAACSGNPVTVVITDQCPGSPCAQESFHFDLSGTAFGAMAIS 147

Query: 233 GMAEQLRNAGKLPIEFTRVECNYPGTNIAFRVDPGSNSQYLAVVIEYEDGQGDLSAVELK 54
           G  +QLRNAG L I+  RV CN+PG  + F VD GSN  Y A V+EYEDG G+L +VELK
Sbjct: 148 GKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATVVEYEDGDGELKSVELK 207

Query: 53  QAPAKTSASDNWVHMDQ 3
           QA      SD+WV M +
Sbjct: 208 QA----LDSDSWVPMQK 220


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