BLASTX nr result

ID: Dioscorea21_contig00033184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033184
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03358.1| predicted protein [Hordeum vulgare subsp. vulgare]    119   3e-25
ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
gb|EAZ11310.1| hypothetical protein OsJ_01174 [Oryza sativa Japo...   117   7e-25
gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indi...   117   7e-25
ref|NP_001042642.1| Os01g0260000 [Oryza sativa Japonica Group] g...   117   7e-25

>dbj|BAK03358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 155

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/108 (54%), Positives = 72/108 (66%)
 Frame = +3

Query: 3   AARACGDVELGEHA*RKLIEVEPHNSGNYTLLFNIYVAHEKWEGVGKLRKMMKDGNVEKV 182
           AAR   D ELGE A   LIE+EPHNSGNY LL NIY   E+W+ V KLRK M+DG +  V
Sbjct: 38  AARTHADAELGEQALVHLIELEPHNSGNYILLSNIYAEQERWDEVSKLRKAMRDGGLRNV 97

Query: 183 P*GNSIEVDGTVHEFTSRDGSHPSFKMIYEVLYSIEGHLRISGFTPML 326
           P  +SIEV G VHEFTSRDGSHP    I+++L  I   ++  G+  +L
Sbjct: 98  PGASSIEVGGVVHEFTSRDGSHPCLHKIHKILREITADMKSIGYVAVL 145


>ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 500

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/108 (56%), Positives = 71/108 (65%)
 Frame = +3

Query: 3   AARACGDVELGEHA*RKLIEVEPHNSGNYTLLFNIYVAHEKWEGVGKLRKMMKDGNVEKV 182
           AAR  GD ELG+ A   LIE+EPHNSGNY LL NIY   E+W+ V KLRK MKD  +  V
Sbjct: 380 AARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNV 439

Query: 183 P*GNSIEVDGTVHEFTSRDGSHPSFKMIYEVLYSIEGHLRISGFTPML 326
           P  +SIEVDG VHEFTSRDGSHP    I +VL  I   ++   F  +L
Sbjct: 440 PGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISFVALL 487


>gb|EAZ11310.1| hypothetical protein OsJ_01174 [Oryza sativa Japonica Group]
          Length = 326

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/108 (55%), Positives = 73/108 (67%)
 Frame = +3

Query: 3   AARACGDVELGEHA*RKLIEVEPHNSGNYTLLFNIYVAHEKWEGVGKLRKMMKDGNVEKV 182
           AAR  GD ELGE A   LIE+EPHNSGNY LL NIY   E+W+ V +LR  M+D  +  V
Sbjct: 209 AARTHGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNV 268

Query: 183 P*GNSIEVDGTVHEFTSRDGSHPSFKMIYEVLYSIEGHLRISGFTPML 326
           P  +SI+VDG VHEFTSRDGSHPS   I EVL +I  +++  G   +L
Sbjct: 269 PGASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALL 316


>gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
          Length = 499

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/108 (55%), Positives = 73/108 (67%)
 Frame = +3

Query: 3   AARACGDVELGEHA*RKLIEVEPHNSGNYTLLFNIYVAHEKWEGVGKLRKMMKDGNVEKV 182
           AAR  GD ELGE A   LIE+EPHNSGNY LL NIY   E+W+ V +LR  M+D  +  V
Sbjct: 382 AARTHGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNV 441

Query: 183 P*GNSIEVDGTVHEFTSRDGSHPSFKMIYEVLYSIEGHLRISGFTPML 326
           P  +SI+VDG VHEFTSRDGSHPS   I EVL +I  +++  G   +L
Sbjct: 442 PGASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALL 489


>ref|NP_001042642.1| Os01g0260000 [Oryza sativa Japonica Group]
           gi|113532173|dbj|BAF04556.1| Os01g0260000, partial
           [Oryza sativa Japonica Group]
          Length = 197

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/108 (55%), Positives = 73/108 (67%)
 Frame = +3

Query: 3   AARACGDVELGEHA*RKLIEVEPHNSGNYTLLFNIYVAHEKWEGVGKLRKMMKDGNVEKV 182
           AAR  GD ELGE A   LIE+EPHNSGNY LL NIY   E+W+ V +LR  M+D  +  V
Sbjct: 80  AARTHGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNV 139

Query: 183 P*GNSIEVDGTVHEFTSRDGSHPSFKMIYEVLYSIEGHLRISGFTPML 326
           P  +SI+VDG VHEFTSRDGSHPS   I EVL +I  +++  G   +L
Sbjct: 140 PGASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALL 187


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