BLASTX nr result

ID: Dioscorea21_contig00033172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033172
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japo...   146   2e-33
gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japo...   146   2e-33
gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indi...   146   2e-33
ref|NP_001047833.1| Os02g0699700 [Oryza sativa Japonica Group] g...   146   2e-33
gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]                         145   3e-33

>dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
          Length = 1525

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/82 (84%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   FYTEFVIETADGKRQKKYKQVFSDNMSKKSEPNITKCKNGENWTKVTFKPDLTKFNMTML 181
           F TEFVIETADG+RQKKYKQVFS+NM KKSEP ITKCK GENWT+VTFKPDL KFNMT L
Sbjct: 170 FSTEFVIETADGRRQKKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHL 229

Query: 182 EDDVVALMKRRVVDLAGTLGKT 247
           E+DVVALM++RVVD+AGTLGKT
Sbjct: 230 ENDVVALMRKRVVDMAGTLGKT 251


>gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japonica Group]
          Length = 1487

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/82 (84%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   FYTEFVIETADGKRQKKYKQVFSDNMSKKSEPNITKCKNGENWTKVTFKPDLTKFNMTML 181
           F TEFVIETADG+RQKKYKQVFS+NM KKSEP ITKCK GENWT+VTFKPDL KFNMT L
Sbjct: 170 FSTEFVIETADGRRQKKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHL 229

Query: 182 EDDVVALMKRRVVDLAGTLGKT 247
           E+DVVALM++RVVD+AGTLGKT
Sbjct: 230 ENDVVALMRKRVVDMAGTLGKT 251


>gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indica Group]
          Length = 1486

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/82 (84%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   FYTEFVIETADGKRQKKYKQVFSDNMSKKSEPNITKCKNGENWTKVTFKPDLTKFNMTML 181
           F TEFVIETADG+RQKKYKQVFS+NM KKSEP ITKCK GENWT+VTFKPDL KFNMT L
Sbjct: 170 FSTEFVIETADGRRQKKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHL 229

Query: 182 EDDVVALMKRRVVDLAGTLGKT 247
           E+DVVALM++RVVD+AGTLGKT
Sbjct: 230 ENDVVALMRKRVVDMAGTLGKT 251


>ref|NP_001047833.1| Os02g0699700 [Oryza sativa Japonica Group]
           gi|113537364|dbj|BAF09747.1| Os02g0699700, partial
           [Oryza sativa Japonica Group]
          Length = 956

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/82 (84%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   FYTEFVIETADGKRQKKYKQVFSDNMSKKSEPNITKCKNGENWTKVTFKPDLTKFNMTML 181
           F TEFVIETADG+RQKKYKQVFS+NM KKSEP ITKCK GENWT+VTFKPDL KFNMT L
Sbjct: 170 FSTEFVIETADGRRQKKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHL 229

Query: 182 EDDVVALMKRRVVDLAGTLGKT 247
           E+DVVALM++RVVD+AGTLGKT
Sbjct: 230 ENDVVALMRKRVVDMAGTLGKT 251


>gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
          Length = 1412

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = +2

Query: 2   FYTEFVIETADGKRQKKYKQVFSDNMSKKSEPNITKCKNGENWTKVTFKPDLTKFNMTML 181
           F TEFVIETADG+RQKKYKQVF +NM KKSEP ITKCK GENWT+VTFKPDL KFNMT L
Sbjct: 164 FSTEFVIETADGRRQKKYKQVFYENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHL 223

Query: 182 EDDVVALMKRRVVDLAGTLGKT 247
           EDDVVALM++RVVD+AGTLGKT
Sbjct: 224 EDDVVALMRKRVVDMAGTLGKT 245


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