BLASTX nr result

ID: Dioscorea21_contig00033079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033079
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC28122.1| inward rectifying K+ channel [Arabidopsis thaliana]    91   1e-16
ref|XP_002453600.1| hypothetical protein SORBIDRAFT_04g008780 [S...    89   3e-16
gb|AAX19659.1| inward rectifying potassium channel [Brassica rap...    88   8e-16
ref|NP_193563.3| Potassium channel KAT2 [Arabidopsis thaliana] g...    88   8e-16
emb|CBI30869.3| unnamed protein product [Vitis vinifera]               87   1e-15

>emb|CAC28122.1| inward rectifying K+ channel [Arabidopsis thaliana]
          Length = 708

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
 Frame = +3

Query: 6   KHMITR--MLSCMESCLKQFSNDESQME---RGSYSSTDLLPSLGETINKSVQLRKYIAS 170
           KH+ TR   +SC  +  K+F  +E  M+     S+ S DLLPSLG  IN+S +LRK+I S
Sbjct: 5   KHLNTRPMSISCTRNFFKRFCVEEYNMDTFKHSSFLSADLLPSLGARINQSTKLRKHIIS 64

Query: 171 PYDPRYRAWEMFLILLVVYSAWVC 242
           P+DPR+R WEM+L++LV+YSAW+C
Sbjct: 65  PFDPRFRGWEMWLVILVIYSAWIC 88


>ref|XP_002453600.1| hypothetical protein SORBIDRAFT_04g008780 [Sorghum bicolor]
           gi|241933431|gb|EES06576.1| hypothetical protein
           SORBIDRAFT_04g008780 [Sorghum bicolor]
          Length = 729

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/69 (63%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = +3

Query: 39  ESCLKQFSNDESQMERGSYSST-DLLPSLGETINKSVQLRKYIASPYDPRYRAWEMFLIL 215
           +SC +QFS D  Q++R S S T +LLPSLG TIN+S +L+K+I SPYDPRYR WE+FLI+
Sbjct: 7   KSCFQQFS-DGVQVKRNSGSFTIELLPSLGATINQSNKLQKFIISPYDPRYRYWELFLIV 65

Query: 216 LVVYSAWVC 242
           LV+YSAW+C
Sbjct: 66  LVIYSAWIC 74


>gb|AAX19659.1| inward rectifying potassium channel [Brassica rapa subsp.
           pekinensis]
          Length = 685

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/75 (52%), Positives = 56/75 (74%), Gaps = 3/75 (4%)
 Frame = +3

Query: 27  LSCMESCLKQFSNDESQME---RGSYSSTDLLPSLGETINKSVQLRKYIASPYDPRYRAW 197
           +SC  +  ++F  +E  M+     S+ S DLLPSLG  IN+S +LRK+I SP+DPR+RAW
Sbjct: 3   ISCTRNFFERFCVEEYNMDARKHSSFLSADLLPSLGARINQSTKLRKHIISPFDPRFRAW 62

Query: 198 EMFLILLVVYSAWVC 242
           EM+L++LV+YSAW+C
Sbjct: 63  EMWLVILVIYSAWIC 77


>ref|NP_193563.3| Potassium channel KAT2 [Arabidopsis thaliana]
           gi|334302889|sp|Q38849.3|KAT2_ARATH RecName:
           Full=Potassium channel KAT2 gi|2832703|emb|CAA16801.1|
           potassium channel protein KAT2 [Arabidopsis thaliana]
           gi|7268622|emb|CAB78831.1| potassium channel protein
           KAT2 [Arabidopsis thaliana] gi|332658621|gb|AEE84021.1|
           Potassium channel KAT2 [Arabidopsis thaliana]
          Length = 697

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
 Frame = +3

Query: 27  LSCMESCLKQFSNDESQME---RGSYSSTDLLPSLGETINKSVQLRKYIASPYDPRYRAW 197
           +SC  +  K+F  +E  M+     S+ S DLLPSLG  IN+S +LRK+I SP+DPR+R W
Sbjct: 3   ISCTRNFFKRFCVEEYNMDTFKHSSFLSADLLPSLGARINQSTKLRKHIISPFDPRFRGW 62

Query: 198 EMFLILLVVYSAWVC 242
           EM+L++LV+YSAW+C
Sbjct: 63  EMWLVILVIYSAWIC 77


>emb|CBI30869.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/74 (55%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
 Frame = +3

Query: 30  SCMESCLKQFSNDESQMER---GSYSSTDLLPSLGETINKSVQLRKYIASPYDPRYRAWE 200
           SC ++  ++F  +E QMER   GS  S+ LLPSLG  IN++ +L+K+I SP+ PRYRAWE
Sbjct: 18  SCAKAFFQRFCVEEFQMERTSLGSVFSSHLLPSLGARINQATKLQKHIISPFSPRYRAWE 77

Query: 201 MFLILLVVYSAWVC 242
           M LI+LV+YSAW+C
Sbjct: 78  MLLIILVIYSAWIC 91


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