BLASTX nr result
ID: Dioscorea21_contig00033076
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00033076 (510 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27 emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera] 125 4e-27 ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2... 121 5e-26 ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25 ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2... 108 5e-22 >ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Vitis vinifera] Length = 662 Score = 125 bits (314), Expect = 4e-27 Identities = 57/86 (66%), Positives = 68/86 (79%) Frame = -3 Query: 508 DFSLHNVDQERGCIVDDHSEMIAIAFGLISTQKRITLRVTKNLPVCRNCHASAKMISKIV 329 DFSLH+VD+ER C+ HSE++A +FGLISTQ T+RVTKNL +C NCH SAK ISKIV Sbjct: 577 DFSLHDVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIV 636 Query: 328 NREILLKDPQRFHHFKNGSCSCKDIW 251 REI++KDP FHHFK+G CSC D W Sbjct: 637 EREIIIKDPSCFHHFKDGFCSCGDFW 662 >emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera] Length = 734 Score = 125 bits (314), Expect = 4e-27 Identities = 57/86 (66%), Positives = 68/86 (79%) Frame = -3 Query: 508 DFSLHNVDQERGCIVDDHSEMIAIAFGLISTQKRITLRVTKNLPVCRNCHASAKMISKIV 329 DFSLH+VD+ER C+ HSE++A +FGLISTQ T+RVTKNL +C NCH SAK ISKIV Sbjct: 649 DFSLHDVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIV 708 Query: 328 NREILLKDPQRFHHFKNGSCSCKDIW 251 REI++KDP FHHFK+G CSC D W Sbjct: 709 EREIIIKDPSCFHHFKDGFCSCGDFW 734 >ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1| predicted protein [Populus trichocarpa] Length = 663 Score = 121 bits (304), Expect = 5e-26 Identities = 53/85 (62%), Positives = 65/85 (76%) Frame = -3 Query: 505 FSLHNVDQERGCIVDDHSEMIAIAFGLISTQKRITLRVTKNLPVCRNCHASAKMISKIVN 326 FS H VD ER CI HSEM+A++FGLI TQ T+R+TKNL +CR CH S K++SKIV Sbjct: 579 FSFHGVDAERECIQIGHSEMLALSFGLICTQPGATIRITKNLRMCRGCHDSTKLVSKIVE 638 Query: 325 REILLKDPQRFHHFKNGSCSCKDIW 251 REI++KDP FHHFK+G CSC+D W Sbjct: 639 REIIIKDPNCFHHFKDGFCSCRDFW 663 >ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis sativus] Length = 629 Score = 119 bits (298), Expect = 3e-25 Identities = 53/84 (63%), Positives = 69/84 (82%) Frame = -3 Query: 508 DFSLHNVDQERGCIVDDHSEMIAIAFGLISTQKRITLRVTKNLPVCRNCHASAKMISKIV 329 DFSLH+VD+ER C+ HSE++AI+FGLIST+ T+R+TKNL VC +CH SAK ISK+V Sbjct: 544 DFSLHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMV 603 Query: 328 NREILLKDPQRFHHFKNGSCSCKD 257 REI++KDP FHHFK+G CSC++ Sbjct: 604 GREIIVKDPYVFHHFKDGCCSCEN 627 >ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa] Length = 736 Score = 108 bits (270), Expect = 5e-22 Identities = 49/84 (58%), Positives = 66/84 (78%), Gaps = 1/84 (1%) Frame = -3 Query: 499 LHNVDQE-RGCIVDDHSEMIAIAFGLISTQKRITLRVTKNLPVCRNCHASAKMISKIVNR 323 L+++D+E + ++ HSE +AIAFGLIST+ T+R+ KNL VC NCH++ K+ISKI NR Sbjct: 653 LYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNR 712 Query: 322 EILLKDPQRFHHFKNGSCSCKDIW 251 EI+ +D RFHHFK+GSCSCKD W Sbjct: 713 EIIARDRNRFHHFKDGSCSCKDYW 736