BLASTX nr result

ID: Dioscorea21_contig00033070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033070
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34956.1| unknown [Lotus japonicus]                               79   4e-13
ref|XP_002309307.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|ACG37433.1| omega-6 fatty acid desaturase, endoplasmic reticu...    77   2e-12
ref|NP_001130234.1| delta-12 fatty acid desaturaseFAD2 [Zea mays...    77   2e-12
gb|ACE97864.1| fatty acid desaturase [Populus tremula]                 77   2e-12

>gb|AFK34956.1| unknown [Lotus japonicus]
          Length = 384

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -1

Query: 213 PYSGFICHFDPFSPIFSSGQRVYVLISDAGILFFCFLLYHLATCFSVSSVMTIYAGPLFI 34
           PY  F CHFDP+ PI+S  +R+ + ISD G+L  CF LYHLA    ++ V+ +Y  PL +
Sbjct: 202 PYERFACHFDPYGPIYSDRERLQIYISDVGVLAVCFGLYHLAVAKGLAWVVCVYGVPLLV 261

Query: 33  LNAAFVVVTYL 1
           +N   V++TYL
Sbjct: 262 VNGFLVLITYL 272


>ref|XP_002309307.1| predicted protein [Populus trichocarpa] gi|222855283|gb|EEE92830.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -1

Query: 213 PYSGFICHFDPFSPIFSSGQRVYVLISDAGILFFCFLLYHLATCFSVSSVMTIYAGPLFI 34
           PY  F CH+DP+ PI++  +RV + ISDAGIL   + LY LA    +  V+ +Y GPL +
Sbjct: 202 PYDRFACHYDPYGPIYNDRERVEIFISDAGILAVTYGLYRLAVAKGLGWVLCVYGGPLLV 261

Query: 33  LNAAFVVVTYL 1
           +NA  V++TYL
Sbjct: 262 VNAFLVLITYL 272


>gb|ACG37433.1| omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 [Zea
           mays]
          Length = 394

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = -1

Query: 213 PYSGFICHFDPFSPIFSSGQRVYVLISDAGILFFCFLLYHLATCFSVSSVMTIYAGPLFI 34
           PY  F CHFDP+ PI++  +R  + +SDAG++   F LY LA  F V  V+ +YA PL I
Sbjct: 209 PYPRFACHFDPYGPIYNDRERAQIFVSDAGVVAVAFGLYKLAAAFGVWWVVRVYAVPLLI 268

Query: 33  LNAAFVVVTYL 1
           +NA  V++TYL
Sbjct: 269 VNAWLVLITYL 279


>ref|NP_001130234.1| delta-12 fatty acid desaturaseFAD2 [Zea mays]
           gi|194688628|gb|ACF78398.1| unknown [Zea mays]
           gi|413938564|gb|AFW73115.1| delta-12 fatty acid
           desaturaseFAD2 [Zea mays]
          Length = 387

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = -1

Query: 213 PYSGFICHFDPFSPIFSSGQRVYVLISDAGILFFCFLLYHLATCFSVSSVMTIYAGPLFI 34
           PY  F CHFDP+ PI++  +R  + +SDAG++   F LY LA  F V  V+ +YA PL I
Sbjct: 209 PYPRFACHFDPYGPIYNDRERAQIFVSDAGVVAVAFGLYKLAAAFGVWWVVRVYAVPLLI 268

Query: 33  LNAAFVVVTYL 1
           +NA  V++TYL
Sbjct: 269 VNAWLVLITYL 279


>gb|ACE97864.1| fatty acid desaturase [Populus tremula]
          Length = 197

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/71 (45%), Positives = 48/71 (67%)
 Frame = -1

Query: 213 PYSGFICHFDPFSPIFSSGQRVYVLISDAGILFFCFLLYHLATCFSVSSVMTIYAGPLFI 34
           PY  F CH+DP+ PI++  +RV + ISDAG+L   + LY LA    ++ V+ +Y GPL +
Sbjct: 78  PYDRFACHYDPYGPIYNDRERVEIFISDAGVLAVTYGLYRLAVAEGLAWVLCVYGGPLLV 137

Query: 33  LNAAFVVVTYL 1
           +NA  V++TYL
Sbjct: 138 VNAFLVLITYL 148


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