BLASTX nr result

ID: Dioscorea21_contig00033038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033038
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   133   1e-29
emb|CBI17533.3| unnamed protein product [Vitis vinifera]              133   1e-29
emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]   133   1e-29
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   131   7e-29
ref|XP_002310223.1| chromatin remodeling complex subunit [Populu...   127   7e-28

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = -3

Query: 256 NNLLMQLRKNCNHPDLLESAYDGSFLYPPIEQIVEQCGKFXXXXXXXXXXXXXRHKVLIF 77
           NNL++QLRKNCNHPDLLESA+DGS+LYPP+EQIVEQCGKF             +HKVLIF
Sbjct: 476 NNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARKHKVLIF 535

Query: 76  SQFTKVLDIMDYYFSEKNIEVCRID 2
           SQ+TK+LDIM+YYFSEK +EVCRID
Sbjct: 536 SQWTKILDIMEYYFSEKGLEVCRID 560


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = -3

Query: 256 NNLLMQLRKNCNHPDLLESAYDGSFLYPPIEQIVEQCGKFXXXXXXXXXXXXXRHKVLIF 77
           NNL++QLRKNCNHPDLLESA+DGS+LYPP+EQIVEQCGKF             +HKVLIF
Sbjct: 517 NNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARKHKVLIF 576

Query: 76  SQFTKVLDIMDYYFSEKNIEVCRID 2
           SQ+TK+LDIM+YYFSEK +EVCRID
Sbjct: 577 SQWTKILDIMEYYFSEKGLEVCRID 601


>emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]
          Length = 716

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = -3

Query: 256 NNLLMQLRKNCNHPDLLESAYDGSFLYPPIEQIVEQCGKFXXXXXXXXXXXXXRHKVLIF 77
           NNL++QLRKNCNHPDLLESA+DGS+LYPP+EQIVEQCGKF             +HKVLIF
Sbjct: 413 NNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARKHKVLIF 472

Query: 76  SQFTKVLDIMDYYFSEKNIEVCRID 2
           SQ+TK+LDIM+YYFSEK +EVCRID
Sbjct: 473 SQWTKILDIMEYYFSEKGLEVCRID 497


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
           communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
           remodeling complex ATPase ISW1, putative [Ricinus
           communis]
          Length = 788

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/85 (71%), Positives = 69/85 (81%)
 Frame = -3

Query: 256 NNLLMQLRKNCNHPDLLESAYDGSFLYPPIEQIVEQCGKFXXXXXXXXXXXXXRHKVLIF 77
           NNL++QLRKNCNHPDLLESA+DGS  YPP+EQIVEQCGKF             +HKVLIF
Sbjct: 505 NNLMIQLRKNCNHPDLLESAFDGSNFYPPVEQIVEQCGKFRLLERLLNRLFALKHKVLIF 564

Query: 76  SQFTKVLDIMDYYFSEKNIEVCRID 2
           SQ+TK+LDIMDYYFSEK +EVCRID
Sbjct: 565 SQWTKILDIMDYYFSEKGLEVCRID 589


>ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853126|gb|EEE90673.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 754

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/84 (71%), Positives = 67/84 (79%)
 Frame = -3

Query: 253 NLLMQLRKNCNHPDLLESAYDGSFLYPPIEQIVEQCGKFXXXXXXXXXXXXXRHKVLIFS 74
           NL++QLRKNC HPDLLESA+DGS+ YPP+EQIVEQCGKF             +HKVLIFS
Sbjct: 471 NLMVQLRKNCYHPDLLESAFDGSYFYPPVEQIVEQCGKFRLLDKLLNRLFALKHKVLIFS 530

Query: 73  QFTKVLDIMDYYFSEKNIEVCRID 2
           Q+TKVLDIMDYYFSEK  EVCRID
Sbjct: 531 QWTKVLDIMDYYFSEKGFEVCRID 554


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