BLASTX nr result
ID: Dioscorea21_contig00033025
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00033025 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316840.1| glutamate-gated kainate-type ion channel rec... 96 2e-18 ref|XP_002333129.1| glutamate-gated kainate-type ion channel rec... 96 3e-18 ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glyc... 94 2e-17 ref|XP_002316842.1| glutamate-gated kainate-type ion channel rec... 93 2e-17 ref|XP_002316843.1| glutamate-gated kainate-type ion channel rec... 92 3e-17 >ref|XP_002316840.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222859905|gb|EEE97452.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 838 Score = 96.3 bits (238), Expect = 2e-18 Identities = 45/101 (44%), Positives = 66/101 (65%) Frame = -2 Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164 GDITILA+R +V+FT P+ ES + M+VP +T W+ +KPF+ + + A FIYT L Sbjct: 458 GDITILAERTEYVEFTQPYAESGLSMIVPFETEDTTWIFVKPFNLEMWMVSCAIFIYTML 517 Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41 I+W+LE ++ N G +K +FGT W FS++FF R K+ Sbjct: 518 IIWFLEHQT-NPEFRGPRKYQFGTAFWFTFSSLFFAQREKL 557 >ref|XP_002333129.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222834928|gb|EEE73377.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 511 Score = 95.9 bits (237), Expect = 3e-18 Identities = 45/101 (44%), Positives = 67/101 (66%) Frame = -2 Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164 GDITILA+R +V+FT P+ +S + M+VP +T W+ LKPF+ + + A FIYT L Sbjct: 130 GDITILAERAEYVEFTQPYAKSGLSMIVPLETEDTAWIFLKPFNLEMWMVSGAMFIYTML 189 Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41 I+W+LE ++ N G +K +FGT LW FS++FF R ++ Sbjct: 190 IIWFLEHQT-NPEFRGPRKYQFGTALWFTFSSLFFAQRERL 229 >ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glycine max] Length = 910 Score = 93.6 bits (231), Expect = 2e-17 Identities = 48/101 (47%), Positives = 63/101 (62%) Frame = -2 Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164 GD+TIL +RM +VDFT+P+ ES + M+VP+K+ + WM KPF+ L + A IYT L Sbjct: 499 GDMTILEERMQYVDFTVPYAESGLSMIVPSKSEESAWMFTKPFTWELWMVTGAILIYTML 558 Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41 VWYLE R N G K + T LW FS++FF R KM Sbjct: 559 AVWYLE-RESNPEFHGNWKSQISTALWFTFSSLFFAHREKM 598 >ref|XP_002316842.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222859907|gb|EEE97454.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 836 Score = 93.2 bits (230), Expect = 2e-17 Identities = 44/101 (43%), Positives = 65/101 (64%) Frame = -2 Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164 GDITILA+R +V+FT P+ ES + M+VP +T W+ LKPF+ + + A IYT L Sbjct: 456 GDITILAERAEYVEFTQPYAESGLSMIVPLETEDTAWIFLKPFNLEMWMVSGAILIYTML 515 Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41 I+W+LE ++ N G K +FGT W +FS++FF R ++ Sbjct: 516 IIWFLENQT-NPEFRGPWKYQFGTAFWFIFSSLFFAQRERL 555 >ref|XP_002316843.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222859908|gb|EEE97455.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 867 Score = 92.4 bits (228), Expect = 3e-17 Identities = 45/101 (44%), Positives = 66/101 (65%) Frame = -2 Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164 GDITILA+R +V+FT P+ ES + M+VP +T + LKPF+ + + A FIYT L Sbjct: 474 GDITILAERAEYVEFTQPYAESGLSMIVPLETEDTTRIFLKPFNLKMWMVSSALFIYTML 533 Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41 I+W+LE ++ N G +K +FGT LW FS++FF R ++ Sbjct: 534 IIWFLEHQT-NPEFRGPRKYQFGTALWFTFSSLFFAQRERL 573