BLASTX nr result

ID: Dioscorea21_contig00033025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033025
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316840.1| glutamate-gated kainate-type ion channel rec...    96   2e-18
ref|XP_002333129.1| glutamate-gated kainate-type ion channel rec...    96   3e-18
ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glyc...    94   2e-17
ref|XP_002316842.1| glutamate-gated kainate-type ion channel rec...    93   2e-17
ref|XP_002316843.1| glutamate-gated kainate-type ion channel rec...    92   3e-17

>ref|XP_002316840.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859905|gb|EEE97452.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 838

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/101 (44%), Positives = 66/101 (65%)
 Frame = -2

Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164
           GDITILA+R  +V+FT P+ ES + M+VP +T    W+ +KPF+  +  +  A FIYT L
Sbjct: 458 GDITILAERTEYVEFTQPYAESGLSMIVPFETEDTTWIFVKPFNLEMWMVSCAIFIYTML 517

Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41
           I+W+LE ++ N    G +K +FGT  W  FS++FF  R K+
Sbjct: 518 IIWFLEHQT-NPEFRGPRKYQFGTAFWFTFSSLFFAQREKL 557


>ref|XP_002333129.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222834928|gb|EEE73377.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 511

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/101 (44%), Positives = 67/101 (66%)
 Frame = -2

Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164
           GDITILA+R  +V+FT P+ +S + M+VP +T    W+ LKPF+  +  +  A FIYT L
Sbjct: 130 GDITILAERAEYVEFTQPYAKSGLSMIVPLETEDTAWIFLKPFNLEMWMVSGAMFIYTML 189

Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41
           I+W+LE ++ N    G +K +FGT LW  FS++FF  R ++
Sbjct: 190 IIWFLEHQT-NPEFRGPRKYQFGTALWFTFSSLFFAQRERL 229


>ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 910

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/101 (47%), Positives = 63/101 (62%)
 Frame = -2

Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164
           GD+TIL +RM +VDFT+P+ ES + M+VP+K+  + WM  KPF+  L  +  A  IYT L
Sbjct: 499 GDMTILEERMQYVDFTVPYAESGLSMIVPSKSEESAWMFTKPFTWELWMVTGAILIYTML 558

Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41
            VWYLE R  N    G  K +  T LW  FS++FF  R KM
Sbjct: 559 AVWYLE-RESNPEFHGNWKSQISTALWFTFSSLFFAHREKM 598


>ref|XP_002316842.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859907|gb|EEE97454.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 836

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/101 (43%), Positives = 65/101 (64%)
 Frame = -2

Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164
           GDITILA+R  +V+FT P+ ES + M+VP +T    W+ LKPF+  +  +  A  IYT L
Sbjct: 456 GDITILAERAEYVEFTQPYAESGLSMIVPLETEDTAWIFLKPFNLEMWMVSGAILIYTML 515

Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41
           I+W+LE ++ N    G  K +FGT  W +FS++FF  R ++
Sbjct: 516 IIWFLENQT-NPEFRGPWKYQFGTAFWFIFSSLFFAQRERL 555


>ref|XP_002316843.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859908|gb|EEE97455.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 867

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/101 (44%), Positives = 66/101 (65%)
 Frame = -2

Query: 343 GDITILADRMPFVDFTLPFTESSIGMLVPTKTSGNVWMVLKPFSKGLLGLIVATFIYTTL 164
           GDITILA+R  +V+FT P+ ES + M+VP +T     + LKPF+  +  +  A FIYT L
Sbjct: 474 GDITILAERAEYVEFTQPYAESGLSMIVPLETEDTTRIFLKPFNLKMWMVSSALFIYTML 533

Query: 163 IVWYLETRSINLNSTGAKKVRFGTTLWLMFSTIFFPLRTKM 41
           I+W+LE ++ N    G +K +FGT LW  FS++FF  R ++
Sbjct: 534 IIWFLEHQT-NPEFRGPRKYQFGTALWFTFSSLFFAQRERL 573