BLASTX nr result

ID: Dioscorea21_contig00032493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032493
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299087.1| hypothetical protein POPTRDRAFT_750403 [Popu...   117   1e-24
dbj|BAL41449.1| SKU5 similar 1 [Linum grandiflorum]                   116   2e-24
ref|XP_002297609.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002523381.1| multicopper oxidase, putative [Ricinus commu...   113   2e-23
ref|XP_002894511.1| hypothetical protein ARALYDRAFT_474617 [Arab...   112   2e-23

>ref|XP_002299087.1| hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa]
           gi|222846345|gb|EEE83892.1| hypothetical protein
           POPTRDRAFT_750403 [Populus trichocarpa]
          Length = 551

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 4/78 (5%)
 Frame = +3

Query: 237 LLLSLVTCFSALAM----AEDPYLYFTWKVTYGIRSPLGVPQKVILINDQFPGPNINSTT 404
           +++ ++ C SA  M     EDPYL+FTW VTYG RSPLGVPQ+VILINDQFPGPNINST+
Sbjct: 4   VMIMVLLCLSAGTMLGVQGEDPYLFFTWNVTYGTRSPLGVPQQVILINDQFPGPNINSTS 63

Query: 405 NNNLVINVFNYLDEPFLL 458
           NNN+V+NVFN LDEPFLL
Sbjct: 64  NNNIVLNVFNNLDEPFLL 81


>dbj|BAL41449.1| SKU5 similar 1 [Linum grandiflorum]
          Length = 552

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/75 (72%), Positives = 67/75 (89%)
 Frame = +3

Query: 234 ILLLSLVTCFSALAMAEDPYLYFTWKVTYGIRSPLGVPQKVILINDQFPGPNINSTTNNN 413
           +LLLSLV+  SA++  EDPYL+FTWKVTYG RSPLG P++VILIND+FPGP +N+TTNNN
Sbjct: 8   LLLLSLVSLISAVS-GEDPYLFFTWKVTYGTRSPLGKPEQVILINDEFPGPALNTTTNNN 66

Query: 414 LVINVFNYLDEPFLL 458
           +V+NVFN LDEPFL+
Sbjct: 67  VVVNVFNNLDEPFLV 81


>ref|XP_002297609.1| predicted protein [Populus trichocarpa] gi|222844867|gb|EEE82414.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 4/78 (5%)
 Frame = +3

Query: 237 LLLSLVTCFSALAM----AEDPYLYFTWKVTYGIRSPLGVPQKVILINDQFPGPNINSTT 404
           ++  ++ C SA AM     EDPYL+FTW VTYG  SPLGVPQ+VILINDQFPGPNINST+
Sbjct: 4   VMFMVLLCLSAGAMLGVQGEDPYLFFTWNVTYGTLSPLGVPQQVILINDQFPGPNINSTS 63

Query: 405 NNNLVINVFNYLDEPFLL 458
           NNN+VINVFN +DEPFLL
Sbjct: 64  NNNIVINVFNNIDEPFLL 81


>ref|XP_002523381.1| multicopper oxidase, putative [Ricinus communis]
           gi|223537331|gb|EEF38960.1| multicopper oxidase,
           putative [Ricinus communis]
          Length = 551

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/76 (72%), Positives = 61/76 (80%)
 Frame = +3

Query: 231 LILLLSLVTCFSALAMAEDPYLYFTWKVTYGIRSPLGVPQKVILINDQFPGPNINSTTNN 410
           LILLL L T        EDPYL+FTW +TYG  SPLGVPQ+VILINDQFPGP INST+NN
Sbjct: 6   LILLLCLTTGAMLGVHGEDPYLFFTWNITYGTLSPLGVPQQVILINDQFPGPVINSTSNN 65

Query: 411 NLVINVFNYLDEPFLL 458
           N+VINVFN +DEPFLL
Sbjct: 66  NVVINVFNNIDEPFLL 81


>ref|XP_002894511.1| hypothetical protein ARALYDRAFT_474617 [Arabidopsis lyrata subsp.
           lyrata] gi|297340353|gb|EFH70770.1| hypothetical protein
           ARALYDRAFT_474617 [Arabidopsis lyrata subsp. lyrata]
          Length = 549

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/77 (67%), Positives = 62/77 (80%)
 Frame = +3

Query: 228 RLILLLSLVTCFSALAMAEDPYLYFTWKVTYGIRSPLGVPQKVILINDQFPGPNINSTTN 407
           RL+ +L  +    A+  A DPY ++TW VTYG  SPLGVPQKVILIN QFPGPN+NST+N
Sbjct: 4   RLLTVLVCLVSTVAIVNAGDPYFFYTWNVTYGTASPLGVPQKVILINGQFPGPNLNSTSN 63

Query: 408 NNLVINVFNYLDEPFLL 458
           NN+VINVFN+LDEPFLL
Sbjct: 64  NNVVINVFNHLDEPFLL 80


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