BLASTX nr result

ID: Dioscorea21_contig00032445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032445
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              158   2e-36
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   133   6e-29
emb|CAN82050.1| hypothetical protein VITISV_042769 [Vitis vinifera]   132   8e-29
emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]   131   2e-28
emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]   131   2e-28

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  158 bits (399), Expect = 2e-36
 Identities = 90/211 (42%), Positives = 122/211 (57%)
 Frame = +2

Query: 2    LVRLQPYRQQTVALRKHQKLSMRYFGPFRILQRIGSVAYRLQLPETARIHPVFHVSLLKK 181
            LV+LQPYRQ +  LRK+QKLSMRYFGPF++L +IG VAY+L+LP  ARIHPVFHVS LK 
Sbjct: 1359 LVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKP 1418

Query: 182  FEGDPTAEQVSQTSSILFNELGPELQPQVVLQTREVLHNGQLFSQALVQWEGLSISEATW 361
            F G  TA+       +   E+GP +QP  +L +R ++       Q LVQWE     EATW
Sbjct: 1419 FNG--TAQDPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATW 1476

Query: 362  EDLDQLQHHYPSLDLEDKVEFIEGGDVMKGYSVKVPSFDKDKGNGLTRQKKCEETDGEHA 541
            ED++ ++  YP+ +LEDKV F   G+V                NG++R +K   T    +
Sbjct: 1477 EDIEDIKASYPTFNLEDKVVFKGEGNVT---------------NGMSRGEKVNNTAESSS 1521

Query: 542  SQGFY*AVTRAQGRSIRDGKEERKKQKRSWK 634
             +G +  +  A    +  GK E+K    SWK
Sbjct: 1522 ERGLHNKL--ADFEELGRGKREKKP---SWK 1547


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  133 bits (334), Expect = 6e-29
 Identities = 69/165 (41%), Positives = 105/165 (63%), Gaps = 1/165 (0%)
 Frame = +2

Query: 5    VRLQPYRQQTVALRKHQKLSMRYFGPFRILQRIGSVAYRLQLPETARIHPVFHVSLLKKF 184
            +RLQPYRQ+++A R  +KL+ R++GPF +LQRIG+ AY+LQLP +++IHPVFHVSLLKK 
Sbjct: 1459 LRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKV 1518

Query: 185  EGD-PTAEQVSQTSSILFNELGPELQPQVVLQTREVLHNGQLFSQALVQWEGLSISEATW 361
             G+ P    +     +   ++   ++P+ +L  R++    Q F++ L++W+GL   EATW
Sbjct: 1519 VGNTPVLPTIPPHIDV---DMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATW 1575

Query: 362  EDLDQLQHHYPSLDLEDKVEFIEGGDVMKGYSVKVPSFDKDKGNG 496
            ED+  +   +PS  LEDKV     G VM  + +K P+    K  G
Sbjct: 1576 EDMSPIHLRFPSFHLEDKVNVWGAGIVM--HQLKKPNLITYKRRG 1618


>emb|CAN82050.1| hypothetical protein VITISV_042769 [Vitis vinifera]
          Length = 188

 Score =  132 bits (333), Expect = 8e-29
 Identities = 69/150 (46%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
 Frame = +2

Query: 2   LVRLQPYRQQTVALRKHQKLSMRYFGPFRILQRIGSVAYRLQLPETARIHPVFHVSLLKK 181
           L +L PYRQQTV  R HQKL+ R++GP++IL++IG VAY+LQLP  AR+HPVFHVSLLK+
Sbjct: 18  LFKLHPYRQQTVFKRVHQKLASRFYGPYQILEKIGPVAYKLQLPVEARVHPVFHVSLLKR 77

Query: 182 FEGDPTAEQVSQTSSILF-NELGPELQPQVVLQTREVLHNGQLFSQALVQWEGLSISEAT 358
           ++ +    +        F ++    L+PQ +L  R +    QL  + LV W+ L   EAT
Sbjct: 78  YQDNGGLAETQPAEIPPFTDDRVVLLEPQAILDYRWIKQGTQLVEEGLVHWKHLPAEEAT 137

Query: 359 WEDLDQLQHHYPSLDLEDKVEFIEGGDVMK 448
           WE  + LQ  +P+LDLEDK + ++GG  M+
Sbjct: 138 WEPTNTLQEMFPNLDLEDK-DPLDGGAYMQ 166


>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
          Length = 1308

 Score =  131 bits (330), Expect = 2e-28
 Identities = 69/138 (50%), Positives = 88/138 (63%)
 Frame = +2

Query: 2    LVRLQPYRQQTVALRKHQKLSMRYFGPFRILQRIGSVAYRLQLPETARIHPVFHVSLLKK 181
            L++L+PYRQQ V  R H+KLS  Y+GP+ IL++IG+VAYRLQLP TARIHPVFHVSLLK 
Sbjct: 1147 LLKLRPYRQQIVFKRGHKKLSNCYYGPYPILEKIGAVAYRLQLPPTARIHPVFHVSLLKS 1206

Query: 182  FEGDPTAEQVSQTSSILFNELGPELQPQVVLQTREVLHNGQLFSQALVQWEGLSISEATW 361
            + G P    +      L +     L+PQ +L TR +        ++LV W+ L   EATW
Sbjct: 1207 YNGTPAVTPLDLPP--LADNGVITLEPQQILDTRWIKRGDTFMEESLVHWKHLPHEEATW 1264

Query: 362  EDLDQLQHHYPSLDLEDK 415
            E  D L H +P L LEDK
Sbjct: 1265 ESTDTLCHQFPHLMLEDK 1282


>emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
          Length = 1122

 Score =  131 bits (329), Expect = 2e-28
 Identities = 71/156 (45%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
 Frame = +2

Query: 5    VRLQPYRQQTVALRKHQKLSMRYFGPFRILQRIGSVAYRLQLPETARIHPVFHVSLLKKF 184
            ++LQPYRQQ+V  R  QKL+ R++GP++I QRIG VAY+L LPE ++IHP+FHVSLLKK 
Sbjct: 903  LKLQPYRQQSVFCRASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKK 962

Query: 185  EGDPTAEQVSQTSSILFNELGP-ELQPQVVLQTREVLHNGQLFSQALVQWEGLSISEATW 361
             G+P    V      L N+ G   L P+ +L TR V    ++F ++LV+W+ L +++ATW
Sbjct: 963  LGEPNNTTVELP---LTNDEGEIVLXPEGILDTRWVKKGSRIFEESLVKWKRLPLNDATW 1019

Query: 362  EDLDQLQHHYPSLDLEDKVEFIEGGDVMKGYSVKVP 469
            ED   LQ  + +++LEDKV   + G      S +VP
Sbjct: 1020 EDTKMLQDRFINVNLEDKVPVQDRGIDEPRRSQRVP 1055


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