BLASTX nr result

ID: Dioscorea21_contig00032440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032440
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA61013.1| TPA: hypothetical protein ZEAMMB73_343744 [Zea m...   115   4e-24
ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
emb|CBI33923.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group] g...   112   4e-23

>tpg|DAA61013.1| TPA: hypothetical protein ZEAMMB73_343744 [Zea mays]
          Length = 557

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/87 (62%), Positives = 68/87 (78%)
 Frame = +1

Query: 1   SVSWNVMLALYARMKNYRECLKLFDGMMAVGDVRPDEAALVSVLTACANLSDLGRGRWVH 180
           +VSWNV+LALYA++K++ ECL LFD MMAVG  +P+E   VSVLTAC +L DL RGRWVH
Sbjct: 276 TVSWNVVLALYAKVKDWHECLNLFDAMMAVGGSKPNEKTFVSVLTACGHLGDLERGRWVH 335

Query: 181 SLIADGKRRIELDVLLSTALLTMYAKC 261
            L+ +   R+  DVLL TA++TMYAKC
Sbjct: 336 HLVHESWERLLPDVLLLTAMMTMYAKC 362


>ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 604

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = +1

Query: 1   SVSWNVMLALYARMKNYRECLKLFDGMMAVGDVRPDEAALVSVLTACANLSDLGRGRWVH 180
           + SWNV+LALYAR K++RECL+LFD MMAVG   P+E   VSVLTAC +L DL RG+WVH
Sbjct: 279 AASWNVVLALYARRKDWRECLRLFDAMMAVGVSVPNEKTFVSVLTACGSLGDLERGKWVH 338

Query: 181 SLIADGKRRIELDVLLSTALLTMYAKC 261
            L+ +   R+  DVLL TALLTMYAKC
Sbjct: 339 GLVRERWDRLVPDVLLLTALLTMYAKC 365


>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +1

Query: 4   VSWNVMLALYARMKNYRECLKLFDGMMAVGDVRPDEAALVSVLTACANLSDLGRGRWVHS 183
           VSWN+MLALY R+K+Y ECL++FD MM  G+  P+EA LVSVLTACA+L  L RG+W+HS
Sbjct: 170 VSWNIMLALYVRIKDYDECLRMFDKMM--GETMPNEATLVSVLTACAHLGRLDRGKWIHS 227

Query: 184 LIADGKRRIELDVLLSTALLTMYAKC 261
            I +  R IE DVLLSTALLTMYAKC
Sbjct: 228 YIKN-NRVIEPDVLLSTALLTMYAKC 252


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +1

Query: 4   VSWNVMLALYARMKNYRECLKLFDGMMAVGDVRPDEAALVSVLTACANLSDLGRGRWVHS 183
           VSWN+MLALY R+K+Y ECL++FD MM  G+  P+EA LVSVLTACA+L  L RG+W+HS
Sbjct: 319 VSWNIMLALYVRIKDYDECLRMFDKMM--GETMPNEATLVSVLTACAHLGRLDRGKWIHS 376

Query: 184 LIADGKRRIELDVLLSTALLTMYAKC 261
            I +  R IE DVLLSTALLTMYAKC
Sbjct: 377 YIKN-NRVIEPDVLLSTALLTMYAKC 401


>ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
           gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|51091564|dbj|BAD36301.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113631371|dbj|BAF25052.1|
           Os09g0407800 [Oryza sativa Japonica Group]
           gi|215740507|dbj|BAG97163.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 612

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/86 (62%), Positives = 67/86 (77%)
 Frame = +1

Query: 4   VSWNVMLALYARMKNYRECLKLFDGMMAVGDVRPDEAALVSVLTACANLSDLGRGRWVHS 183
           VSWNV+LALYA+++++RECL LFD M+A G+  P+E   VSVLTACANL DL +GRWVH 
Sbjct: 282 VSWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHD 341

Query: 184 LIADGKRRIELDVLLSTALLTMYAKC 261
           L+ +   R+  DVLL T LLTMYAKC
Sbjct: 342 LVQERWDRLVPDVLLLTTLLTMYAKC 367


Top