BLASTX nr result

ID: Dioscorea21_contig00032439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032439
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]    60   9e-07
emb|CBI31771.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_002279964.1| PREDICTED: uncharacterized protein LOC100255...    59   1e-06
ref|XP_003566038.1| PREDICTED: uncharacterized protein LOC100829...    56   9e-06

>emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]
          Length = 1138

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
 Frame = +1

Query: 253 DSVSHIDAMSAMTIVRNPTSHQSASCLTMNMEANGRQL---HSVSDPNVIMYNQIPEFQH 423
           D    I A  ++  VR   SH  +SC+++N  ANGR      S ++ +     Q   F H
Sbjct: 407 DPTPRISATRSIANVR-ALSHPLSSCVSVNENANGRLSFLPQSTTENHNTRALQYQPFSH 465

Query: 424 RCLQSADDMMGRICFTTGSKGIGESRITSNPASFCRERCIDNDFIGLPLNSHGEFIHLHS 603
               S+ ++M  +    GSK         + A    E+C+D+DF GLPLNSHGE I L+S
Sbjct: 466 L---SSKELMDSLSSFPGSK---------HRALLFGEKCMDDDFFGLPLNSHGELIRLNS 513

Query: 604 GHKFGFGDVSN 636
             K G   + N
Sbjct: 514 SGKDGLNHLKN 524


>emb|CBI31771.3| unnamed protein product [Vitis vinifera]
          Length = 1244

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
 Frame = +1

Query: 253 DSVSHIDAMSAMTIVRNPTSHQSASCLTMNMEANGRQL---HSVSDPNVIMYNQIPEFQH 423
           D    I A  ++  VR   SH  +SC+++N  ANGR      S ++ +     Q   F H
Sbjct: 493 DPTPRISATRSIANVR-ALSHPLSSCVSVNENANGRLSFLPQSTTENHNTRALQYQPFSH 551

Query: 424 RCLQSADDMMGRICFTTGSKGIGESRITSNPASFCRERCIDNDFIGLPLNSHGEFIHLHS 603
               S+ ++M  +    GSK         + A    E+C+D+DF GLPLNSHGE I L+S
Sbjct: 552 L---SSKELMDSLSPFPGSK---------HRALLFGEKCMDDDFFGLPLNSHGELIRLNS 599

Query: 604 GHKFGFGDVSN 636
             K G   + N
Sbjct: 600 SGKDGLNHLKN 610


>ref|XP_002279964.1| PREDICTED: uncharacterized protein LOC100255858 [Vitis vinifera]
          Length = 1000

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
 Frame = +1

Query: 253 DSVSHIDAMSAMTIVRNPTSHQSASCLTMNMEANGRQL---HSVSDPNVIMYNQIPEFQH 423
           D    I A  ++  VR   SH  +SC+++N  ANGR      S ++ +     Q   F H
Sbjct: 269 DPTPRISATRSIANVR-ALSHPLSSCVSVNENANGRLSFLPQSTTENHNTRALQYQPFSH 327

Query: 424 RCLQSADDMMGRICFTTGSKGIGESRITSNPASFCRERCIDNDFIGLPLNSHGEFIHLHS 603
               S+ ++M  +    GSK         + A    E+C+D+DF GLPLNSHGE I L+S
Sbjct: 328 L---SSKELMDSLSPFPGSK---------HRALLFGEKCMDDDFFGLPLNSHGELIRLNS 375

Query: 604 GHKFGFGDVSN 636
             K G   + N
Sbjct: 376 SGKDGLNHLKN 386


>ref|XP_003566038.1| PREDICTED: uncharacterized protein LOC100829178 [Brachypodium
            distachyon]
          Length = 1120

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 57/215 (26%), Positives = 81/215 (37%), Gaps = 5/215 (2%)
 Frame = +1

Query: 154  VQIPLPEGSSSNAESHAIESSTEARMTLPAPIQDSVSHIDAMSAMTIVRNPTSHQSASCL 333
            V   L EG   +    A E+   A    P P   +V         T    P+S +    L
Sbjct: 392  VDFHLQEGIYLDIGWQAEENHRMAPQGTPVPACLAVGTRPGHPMRTPFPQPSSSRYVGAL 451

Query: 334  TMNMEANGRQLHSVSDPNVIMYNQIPEFQHRCLQSADDMMGRICFTTGSKGIGESRITSN 513
                EA  R   +V    ++    + E     L S  DM+  I  T  +K       T++
Sbjct: 452  K---EAYDRNRSTVMHEKLVANGHLTEVHPSVLSSGKDMLSTISSTGSNKSTDPQ--TTD 506

Query: 514  PASFCRERCIDNDFIGLPLNSHGEFIHLHSGHKFGFGDVSNKQRXXXXXXXXXXGPQLFE 693
              S CR     +D+IGLP+NSHGEF+ +  G       V  +Q            P    
Sbjct: 507  SVSACRNISASDDYIGLPVNSHGEFVRVQPGGTLNSKGVLKRQCSLEDSVYPSASPTFST 566

Query: 694  HNHSMD--HLQVKDR---FPSVSMYEKDQWLPGPH 783
             N SMD  H +V  +   F +V+ +   Q   GPH
Sbjct: 567  PNTSMDYAHSRVNHQALPFSTVANFGIQQ---GPH 598


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