BLASTX nr result

ID: Dioscorea21_contig00032436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032436
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   130   1e-28
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...    94   1e-17
ref|XP_003525745.1| PREDICTED: uncharacterized protein LOC100809...    91   1e-16
ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    90   2e-16
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    90   2e-16

>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  130 bits (328), Expect = 1e-28
 Identities = 68/163 (41%), Positives = 97/163 (59%), Gaps = 8/163 (4%)
 Frame = -1

Query: 466 MADPDLIAAIKAVQ----AQLDTQSRSFHQ----HMESVDARFADLRLQLXXXXXXXXXX 311
           MAD D+++A+KA+Q    AQ ++Q+ SFHQ    +M +VD+R  + R Q           
Sbjct: 175 MADSDVLSAVKALQDQFEAQFESQTVSFHQILQQYMSTVDSRLEEFRSQFRGSSAGLLGP 234

Query: 310 XXXXXXXXXXXXXXXXXXXXPYLRALKMDIPKFDGSDPDGWIFRIDEFFSIHNTPAAVRL 131
                                 LR +KM+IPKF+G+DP GW+FR++EFF  H TP  +RL
Sbjct: 235 PPAPPPVPEMGVGSNELATA--LRFMKMEIPKFNGTDPHGWVFRVEEFFDFHGTPEPLRL 292

Query: 130 RIASFLMEGRASAWFQWMKGNHLITTWPAFLQHLQQRFGDSIF 2
           RI SF MEG A+ W+QWMK N+L+++W AFL  L+ RFG S++
Sbjct: 293 RIVSFHMEGPAAGWYQWMKANNLLSSWKAFLLSLKHRFGASLY 335


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = -1

Query: 238 ALKMDIPKFDGSDPDGWIFRIDEFFSIHNTPAAVRLRIASFLMEGRASAWFQWMKGNHLI 59
           A K+D+P FDG DP GWIF+I +FF    TP   R+ +ASF ++G A +WFQWM  N  I
Sbjct: 29  ANKLDVPCFDGHDPLGWIFKISQFFEYQGTPEEERITVASFYLDGAALSWFQWMHQNGFI 88

Query: 58  TTWPAFLQHLQQRFGDSIF 2
           T+WPA LQ ++ RF  S +
Sbjct: 89  TSWPALLQAIETRFAPSFY 107


>ref|XP_003525745.1| PREDICTED: uncharacterized protein LOC100809540 [Glycine max]
          Length = 1232

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/78 (50%), Positives = 51/78 (65%)
 Frame = -1

Query: 235 LKMDIPKFDGSDPDGWIFRIDEFFSIHNTPAAVRLRIASFLMEGRASAWFQWMKGNHLIT 56
           +K+++P+FDG DP GWIF+I +FF       A RL +ASF MEG A  WFQWM  N  +T
Sbjct: 1   MKLEVPRFDGKDPLGWIFKITQFFDYQGVSDAERLTVASFYMEGPALCWFQWMSRNGFLT 60

Query: 55  TWPAFLQHLQQRFGDSIF 2
           +W A LQ L+ RF  S +
Sbjct: 61  SWQAMLQALETRFAPSYY 78


>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 37/78 (47%), Positives = 54/78 (69%)
 Frame = -1

Query: 235 LKMDIPKFDGSDPDGWIFRIDEFFSIHNTPAAVRLRIASFLMEGRASAWFQWMKGNHLIT 56
           +K+D+P+FDGSDP GWIF+I + F    TP   R+ +ASF ++G A +W+QWM  N  IT
Sbjct: 61  VKIDVPRFDGSDPVGWIFKITQLFEYQGTPEEERVTLASFYLDGPALSWYQWMFRNGFIT 120

Query: 55  TWPAFLQHLQQRFGDSIF 2
           +W +FLQ L+ RF  + +
Sbjct: 121 SWSSFLQALESRFAPTYY 138


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/78 (50%), Positives = 53/78 (67%)
 Frame = -1

Query: 235 LKMDIPKFDGSDPDGWIFRIDEFFSIHNTPAAVRLRIASFLMEGRASAWFQWMKGNHLIT 56
           +K+++ +F+GSDP+GWIF+I +FF  H TP   RL IASF MEG A AWFQWM  N  ++
Sbjct: 61  MKLEVSRFNGSDPEGWIFKITQFFEYHATPDHERLTIASFYMEGLALAWFQWMHRNGQLS 120

Query: 55  TWPAFLQHLQQRFGDSIF 2
           +W  FL  +  RF  S +
Sbjct: 121 SWSTFLHAIHARFLSSTY 138


Top