BLASTX nr result

ID: Dioscorea21_contig00032433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032433
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]   162   9e-38
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...   151   2e-34
ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] g...   141   1e-31
gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japo...   141   1e-31
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   140   2e-31

>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score =  162 bits (409), Expect = 9e-38
 Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 14/260 (5%)
 Frame = -1

Query: 749  SNGLDQALINKITVCTYKRDDGLIDSTDCSVCLSEFREDESLRLLPKCNHAFHLHCIDTW 570
            + GLD+ALI  IT+C YK+ DGL++ TDCSVCLSEF EDESLRLLPKC+HAFH+ CIDTW
Sbjct: 1116 TTGLDEALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEDESLRLLPKCSHAFHVQCIDTW 1175

Query: 569  LTSHSNCPLCRASIISVN---QMXXXXXXXXXXXXXXXXESSIELAVVAIRESNNTRXXX 399
            L SHSNCPLCRA+I+                        +S +E   VA+ E +  R   
Sbjct: 1176 LKSHSNCPLCRANIVPTTVSPTQLPPPVMEXPLNNEPSQQSQLEHENVAVGE-DLERVAE 1234

Query: 398  XXXXXXXXXENHEPNNDVTKDNEQDDHDHKIDVDKEDETVQVIXXXXXXXXXXXXXXXXX 219
                         P+   +     ++ D  I++  E E                      
Sbjct: 1235 EEEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGE------QQIRRSISLDYSXQTR 1288

Query: 218  XSIADVLRLSIDDESQV--FEFSRPENKGSSSNRI---------SRGLHCVISPVPMKRS 72
             S+AD+L ++ D++ Q+   +   P + GSS   +         +R LHCV+SPV MKRS
Sbjct: 1289 LSVADILLMNEDEDPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRS 1348

Query: 71   FSSGRFCFTRNAREKTSVLP 12
            FSSGR  FTR+AR +  ++P
Sbjct: 1349 FSSGRLLFTRHARGRDGIIP 1368


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score =  151 bits (381), Expect = 2e-34
 Identities = 97/273 (35%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
 Frame = -1

Query: 749 SNGLDQALINKITVCTYKRDDGLIDSTDCSVCLSEFREDESLRLLPKCNHAFHLHCIDTW 570
           +NGLD+ LI  ITVC YK++DGL+D TDCSVCL+EF++DES+RLLPKC+HAFHL CIDTW
Sbjct: 120 TNGLDETLIKSITVCKYKKNDGLVDVTDCSVCLNEFQDDESIRLLPKCSHAFHLPCIDTW 179

Query: 569 LTSHSNCPLCRASIISVNQMXXXXXXXXXXXXXXXXESSIELAVVAIRESNNTRXXXXXX 390
           L SHSNCPLCRA+I + N                   S+ E+++                
Sbjct: 180 LKSHSNCPLCRATIFAFNSSNSSAATLHLPAPVIENPSTNEVSL---------------- 223

Query: 389 XXXXXXENHEPNN--DVTKDNEQD----------------------DHDHKIDVDKEDET 282
                 E   PN   DV +DNE D                           I++   +E 
Sbjct: 224 ------ETQHPNEVLDVERDNELDVVEEVPIPKTEFRALSDLGNLRGRHSVIEIRDHNED 277

Query: 281 VQVIXXXXXXXXXXXXXXXXXXSIADVLRLSIDDESQVFEFSRPENKG-SSSNRIS---R 114
                                    +V+ ++ + +    E S    +G S S++ S   +
Sbjct: 278 YHESIRRSFSMDHSFQSGVLNVDDVNVMHMNQEQDCSQGEGSSKRLRGESESSKCSYRRK 337

Query: 113 GLHCVISPVPMKRSFSSGRFCFTRNAREKTSVL 15
            LHCV+SP+ MKRSFSSGRF  +R+ R +  VL
Sbjct: 338 VLHCVLSPIAMKRSFSSGRFFLSRSGRGRLGVL 370


>ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group]
           gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING
           finger)-like [Oryza sativa Japonica Group]
           gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING
           finger)-like [Oryza sativa Japonica Group]
           gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa
           Japonica Group] gi|215697950|dbj|BAG92134.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 389

 Score =  141 bits (356), Expect = 1e-31
 Identities = 101/270 (37%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
 Frame = -1

Query: 749 SNGLDQALINKITVCTYKRDDGLIDSTDCSVCLSEFREDESLRLLPKCNHAFHLHCIDTW 570
           S+G+D+ LINKITVC Y+R DG +DSTDCSVCL EFRE ESLRLLPKC+HAFH+ CIDTW
Sbjct: 136 SDGMDETLINKITVCKYRRGDGFVDSTDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTW 195

Query: 569 LTSHSNCPLCRASIISVNQMXXXXXXXXXXXXXXXXESSIELAVVAIRESNNTRXXXXXX 390
           L SHSNCPLCR +I  V                     S E      RE           
Sbjct: 196 LKSHSNCPLCRCNIAFVT----------------VGMVSPEPEARVPREDRRDNHELVLT 239

Query: 389 XXXXXXENHEPNNDVT---KDNEQDDHDHKIDVDKED---------ETVQVIXXXXXXXX 246
                    EP N VT     N   +H+ K    + +         E   ++        
Sbjct: 240 IDNPEHVREEPQNVVTGVAVGNGGRNHEAKDGPGRSEDANGTAEIREDGALMPPTRAPSS 299

Query: 245 XXXXXXXXXXSIADVLRLSIDDESQVFEFSRPENKGSSSNRISRGLH----------CVI 96
                     SIADVL+ S++DE  V   S      S S+R   G H           + 
Sbjct: 300 LSDTHREGRMSIADVLQASLEDELMVARESGLLAGSSGSSRRCHGEHSKDGGGRSGRALP 359

Query: 95  SPVPMKRSFSSGRFCF-TRNAREKTSVLPL 9
               MKR   +GR CF +R+ R K SVLP+
Sbjct: 360 DGANMKRLAPAGRSCFSSRSGRGKDSVLPM 389


>gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japonica Group]
          Length = 386

 Score =  141 bits (356), Expect = 1e-31
 Identities = 101/270 (37%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
 Frame = -1

Query: 749 SNGLDQALINKITVCTYKRDDGLIDSTDCSVCLSEFREDESLRLLPKCNHAFHLHCIDTW 570
           S+G+D+ LINKITVC Y+R DG +DSTDCSVCL EFRE ESLRLLPKC+HAFH+ CIDTW
Sbjct: 133 SDGMDETLINKITVCKYRRGDGFVDSTDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTW 192

Query: 569 LTSHSNCPLCRASIISVNQMXXXXXXXXXXXXXXXXESSIELAVVAIRESNNTRXXXXXX 390
           L SHSNCPLCR +I  V                     S E      RE           
Sbjct: 193 LKSHSNCPLCRCNIAFVT----------------VGMVSPEPEARVPREDRRDNHELVLT 236

Query: 389 XXXXXXENHEPNNDVT---KDNEQDDHDHKIDVDKED---------ETVQVIXXXXXXXX 246
                    EP N VT     N   +H+ K    + +         E   ++        
Sbjct: 237 IDNPEHVREEPQNVVTGVAVGNGGRNHEAKDGPGRSEDANGTAEIREDGALMPPTRAPSS 296

Query: 245 XXXXXXXXXXSIADVLRLSIDDESQVFEFSRPENKGSSSNRISRGLH----------CVI 96
                     SIADVL+ S++DE  V   S      S S+R   G H           + 
Sbjct: 297 LSDTHREGRMSIADVLQASLEDELMVARESGLLAGSSGSSRRCHGEHSKDGGGRSGRALP 356

Query: 95  SPVPMKRSFSSGRFCF-TRNAREKTSVLPL 9
               MKR   +GR CF +R+ R K SVLP+
Sbjct: 357 DGANMKRLAPAGRSCFSSRSGRGKDSVLPM 386


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  140 bits (354), Expect = 2e-31
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = -1

Query: 749 SNGLDQALINKITVCTYKRDDGLIDSTDCSVCLSEFREDESLRLLPKCNHAFHLHCIDTW 570
           + GLD+ALI  ITVC YKR+DGL++ +DCSVCLSEF+EDESLRLLPKC+HAFHL CIDTW
Sbjct: 116 TTGLDEALIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTW 175

Query: 569 LTSHSNCPLCRASIISVN 516
           L SHSNCPLCRA+IIS+N
Sbjct: 176 LKSHSNCPLCRANIISIN 193



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
 Frame = -1

Query: 212 IADVLRLSIDDESQVFEFSRPENKGSSSNRIS---------RGLHCVISPVPMKRSFSSG 60
           IADVLRL+ DD   + E     + GSS + +          R LHCV+SPV MKRSFSSG
Sbjct: 284 IADVLRLNEDDFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSG 343

Query: 59  RFCFTRNAREKTSVLPL 9
           R   T++ RE   + P+
Sbjct: 344 RLSLTKHGREHRGIAPV 360


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