BLASTX nr result
ID: Dioscorea21_contig00032426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00032426
(902 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2... 457 e-126
emb|CBI39775.3| unnamed protein product [Vitis vinifera] 454 e-125
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi... 454 e-125
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi... 451 e-124
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera] 448 e-124
>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
predicted protein [Populus trichocarpa]
Length = 514
Score = 457 bits (1175), Expect = e-126
Identities = 217/299 (72%), Positives = 254/299 (84%)
Frame = +3
Query: 3 YIKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTF 182
Y+KCGC++ AR VF M ERTVVSWSAMI G AMHGQ EEAL LF++M + G++PN VTF
Sbjct: 187 YVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTF 246
Query: 183 VGLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMP 362
+GLLHACSHMGL+DEGRRFF SM DYG++P+IEHYGC+VDL SRAGLLEEAHEFI MP
Sbjct: 247 IGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP 306
Query: 363 VEPNGVVWGALLGGARVHKDIKMGEEAIKHLVKLDPSNDGYYVVLSNIYADAGHFDAAAQ 542
++PNGVVWGALLGG +VHK+I + EEAIKHL +LDP NDGYYVV+SNIYA+A ++ AA+
Sbjct: 307 IKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAAR 366
Query: 543 VRRLMRDQGVKKTPGWSTITINSVTHEFVAGESKHPQTEEIYKKWDELLHEMKLRGYVPD 722
VR+LM+D+GVKKT GWS+IT+N V HEFVAG+ HPQ E+I K WD+LL +MK RGY P
Sbjct: 367 VRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPK 426
Query: 723 SSVVLLDMDEAEKEHVLYRHSEKLAVVFGLMNTPPGTTIRIMKNLRVCSDCHAALKLIS 899
+SVVLLDM+E EKE LYRHSEKLAVVFGLM TP GT IRIMKNLRVC DCHAALK+IS
Sbjct: 427 TSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIIS 485
Score = 80.5 bits (197), Expect = 5e-13
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Frame = +3
Query: 9 KCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTFVG 188
K G +D A F M + V SW++MI G G+ EA++LF K+E+ +RPN VT V
Sbjct: 88 KRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVS 147
Query: 189 LLHACSHMGLLDEGRRFFTSMIEDY----GLVPEIEHYGCMVDLLSRAGLLEEAHEFIRK 356
+L AC+ +G LD GR ++ +Y G + ++D+ + G LE A +
Sbjct: 148 VLAACADLGDLDLGR-----IVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYE 202
Query: 357 MPVEPNGVVWGALLGGARVHKDIKMGEEAIKHLVKLDPSNDG 482
M E V W A++ G +H + ++KL +G
Sbjct: 203 ME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 454 bits (1167), Expect = e-125
Identities = 210/299 (70%), Positives = 254/299 (84%)
Frame = +3
Query: 3 YIKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTF 182
Y+KCGC++ A VF+ M ERTVVSWSAMIGG AMHG+ EEAL LF+ M + GI PN VTF
Sbjct: 272 YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 331
Query: 183 VGLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMP 362
+GLLHACSHMGL+ EGRRFF SM DYG++P+IEHYGCMVDLLSRAGLL EAHEFI MP
Sbjct: 332 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 391
Query: 363 VEPNGVVWGALLGGARVHKDIKMGEEAIKHLVKLDPSNDGYYVVLSNIYADAGHFDAAAQ 542
++PNGVVWGALLG RVHK+++M EEAIKHL++LDP NDGYYVVLSNIYA+AG ++ A+
Sbjct: 392 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTAR 451
Query: 543 VRRLMRDQGVKKTPGWSTITINSVTHEFVAGESKHPQTEEIYKKWDELLHEMKLRGYVPD 722
VR+ M+D+ VKKTPGWS+IT++ V HEFVAGE HP TE+I+++W+ELL EM+L+GYVP+
Sbjct: 452 VRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 511
Query: 723 SSVVLLDMDEAEKEHVLYRHSEKLAVVFGLMNTPPGTTIRIMKNLRVCSDCHAALKLIS 899
+SVVLLD++E EK + RHSEKLA+VFGLMNTP T IRIMKNLR+C DCH+A KLIS
Sbjct: 512 TSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLIS 570
Score = 81.6 bits (200), Expect = 2e-13
Identities = 46/126 (36%), Positives = 71/126 (56%)
Frame = +3
Query: 72 SWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTFVGLLHACSHMGLLDEGRRFFTSM 251
SW++MI G+ G+ +EA+ LFAKMEE+G++ N VT V +L AC+ +G LD G R
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH-EY 252
Query: 252 IEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMPVEPNGVVWGALLGGARVHKDIKM 431
+G + ++D+ + G LEEA + +M E V W A++GG +H
Sbjct: 253 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMH---GR 308
Query: 432 GEEAIK 449
EEA++
Sbjct: 309 AEEALR 314
>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 454 bits (1167), Expect = e-125
Identities = 210/299 (70%), Positives = 254/299 (84%)
Frame = +3
Query: 3 YIKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTF 182
Y+KCGC++ A VF+ M ERTVVSWSAMIGG AMHG+ EEAL LF+ M + GI PN VTF
Sbjct: 305 YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 364
Query: 183 VGLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMP 362
+GLLHACSHMGL+ EGRRFF SM DYG++P+IEHYGCMVDLLSRAGLL EAHEFI MP
Sbjct: 365 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 363 VEPNGVVWGALLGGARVHKDIKMGEEAIKHLVKLDPSNDGYYVVLSNIYADAGHFDAAAQ 542
++PNGVVWGALLG RVHK+++M EEAIKHL++LDP NDGYYVVLSNIYA+AG ++ A+
Sbjct: 425 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTAR 484
Query: 543 VRRLMRDQGVKKTPGWSTITINSVTHEFVAGESKHPQTEEIYKKWDELLHEMKLRGYVPD 722
VR+ M+D+ VKKTPGWS+IT++ V HEFVAGE HP TE+I+++W+ELL EM+L+GYVP+
Sbjct: 485 VRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 544
Query: 723 SSVVLLDMDEAEKEHVLYRHSEKLAVVFGLMNTPPGTTIRIMKNLRVCSDCHAALKLIS 899
+SVVLLD++E EK + RHSEKLA+VFGLMNTP T IRIMKNLR+C DCH+A KLIS
Sbjct: 545 TSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLIS 603
Score = 92.0 bits (227), Expect = 2e-16
Identities = 55/148 (37%), Positives = 83/148 (56%)
Frame = +3
Query: 6 IKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTFV 185
IK G + A ++F M ER V SW++MI G+ G+ +EA+ LFAKMEE+G++ N VT V
Sbjct: 205 IKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVV 264
Query: 186 GLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMPV 365
+L AC+ +G LD G R +G + ++D+ + G LEEA + +M
Sbjct: 265 AVLAACADLGALDLGMRIH-EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME- 322
Query: 366 EPNGVVWGALLGGARVHKDIKMGEEAIK 449
E V W A++GG +H EEA++
Sbjct: 323 ERTVVSWSAMIGGLAMH---GRAEEALR 347
>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
[Cucumis sativus]
Length = 617
Score = 451 bits (1160), Expect = e-124
Identities = 207/299 (69%), Positives = 253/299 (84%)
Frame = +3
Query: 3 YIKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTF 182
Y+KCGC++ A +FD M ERTVVSWSAMI G A HG+ E+AL LF KM +G++PN+VTF
Sbjct: 290 YVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTF 349
Query: 183 VGLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMP 362
+G+LHACSHMG++++GR++F SM DYG+VP IEHYGCMVDL SRAGLL+EAHEFI MP
Sbjct: 350 IGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMP 409
Query: 363 VEPNGVVWGALLGGARVHKDIKMGEEAIKHLVKLDPSNDGYYVVLSNIYADAGHFDAAAQ 542
+ PNGVVWGALLGG +VHK+IK+ EEA +HL KLDP NDGYYVVLSNIYA+AG ++ A+
Sbjct: 410 IAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVAR 469
Query: 543 VRRLMRDQGVKKTPGWSTITINSVTHEFVAGESKHPQTEEIYKKWDELLHEMKLRGYVPD 722
VR+LMRD+GVKKTPGWS+I + V + FVAG+ HPQTEEI++ W++LL MKL+GYVP+
Sbjct: 470 VRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPN 529
Query: 723 SSVVLLDMDEAEKEHVLYRHSEKLAVVFGLMNTPPGTTIRIMKNLRVCSDCHAALKLIS 899
+SVVLLDM+E +KE LYRHSEKLAVVFGL+ T PGT IRIMKNLRVC DCHAALK+IS
Sbjct: 530 TSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIIS 588
Score = 87.4 bits (215), Expect = 4e-15
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Frame = +3
Query: 6 IKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTFV 185
+K G + A +F M ER V SW++MIGG+A G+ +EA++LF +ME++G+ PN VT V
Sbjct: 190 VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVV 249
Query: 186 GLLHACSHMGLLDEGRRFFTSMIEDY----GLVPEIEHYGCMVDLLSRAGLLEEAHEFIR 353
+L AC+ MG L GRR I D+ G I ++D+ + G LE+A
Sbjct: 250 AVLVACADMGNLVLGRR-----IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 354 KMPVEPNGVVWGALLGGARVH 416
M E V W A++ G H
Sbjct: 305 NME-ERTVVSWSAMIAGLAAH 324
>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 448 bits (1153), Expect = e-124
Identities = 206/297 (69%), Positives = 252/297 (84%)
Frame = +3
Query: 3 YIKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTF 182
Y+KCGC++ A VF+ M ERTVVSWSAMIGG AMHG+ EEAL LF+ M + GI PN VTF
Sbjct: 305 YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 364
Query: 183 VGLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMP 362
+GLLHACSHMGL+ EGRRFF SM DYG++P+IEHYGCMVDLLSRAGLL EAHEFI MP
Sbjct: 365 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 363 VEPNGVVWGALLGGARVHKDIKMGEEAIKHLVKLDPSNDGYYVVLSNIYADAGHFDAAAQ 542
++PNGVVWGALLG RVHK+++M EEAIKHL++LDP NDGYYVVLSNIYA+AG ++ A+
Sbjct: 425 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTAR 484
Query: 543 VRRLMRDQGVKKTPGWSTITINSVTHEFVAGESKHPQTEEIYKKWDELLHEMKLRGYVPD 722
VR+ M+D+ VKKTPGWS+IT++ V HEFVAGE HP TE+I+++W+ELL EM+L+GYVP+
Sbjct: 485 VRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 544
Query: 723 SSVVLLDMDEAEKEHVLYRHSEKLAVVFGLMNTPPGTTIRIMKNLRVCSDCHAALKL 893
+SVVLLD++E EK + RHSEKLA+VFGLMNTP T IRIMKNLR+C DCH+A ++
Sbjct: 545 TSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFQI 601
Score = 92.0 bits (227), Expect = 2e-16
Identities = 55/148 (37%), Positives = 83/148 (56%)
Frame = +3
Query: 6 IKCGCVDIARNVFDGMTERTVVSWSAMIGGHAMHGQGEEALELFAKMEESGIRPNSVTFV 185
IK G + A ++F M ER V SW++MI G+ G+ +EA+ LFAKMEE+G++ N VT V
Sbjct: 205 IKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVV 264
Query: 186 GLLHACSHMGLLDEGRRFFTSMIEDYGLVPEIEHYGCMVDLLSRAGLLEEAHEFIRKMPV 365
+L AC+ +G LD G R +G + ++D+ + G LEEA + +M
Sbjct: 265 AVLAACADLGALDLGMRIH-EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME- 322
Query: 366 EPNGVVWGALLGGARVHKDIKMGEEAIK 449
E V W A++GG +H EEA++
Sbjct: 323 ERTVVSWSAMIGGLAMH---GRAEEALR 347