BLASTX nr result
ID: Dioscorea21_contig00032422
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00032422 (203 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 113 2e-23 emb|CBI26376.3| unnamed protein product [Vitis vinifera] 113 2e-23 ref|XP_002264931.1| PREDICTED: DNA repair protein XRCC4-like [Vi... 109 3e-22 ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu... 106 2e-21 ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 104 7e-21 >ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera] Length = 259 Score = 113 bits (282), Expect = 2e-23 Identities = 50/65 (76%), Positives = 55/65 (84%) Frame = -2 Query: 199 WFNSHFHLSITDGLHAWTCHATEAEVRLRAEQWDQPVSDYLALVERYLGVQQPGSCYAFE 20 WF SHFHLSITDGLHAW C+A+E EVR RA QWDQPVSDY+AL ER+LG QQPGS Y F Sbjct: 27 WFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFS 86 Query: 19 DAGNG 5 DAG+G Sbjct: 87 DAGDG 91 >emb|CBI26376.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 113 bits (282), Expect = 2e-23 Identities = 50/65 (76%), Positives = 55/65 (84%) Frame = -2 Query: 199 WFNSHFHLSITDGLHAWTCHATEAEVRLRAEQWDQPVSDYLALVERYLGVQQPGSCYAFE 20 WF SHFHLSITDGLHAW C+A+E EVR RA QWDQPVSDY+AL ER+LG QQPGS Y F Sbjct: 27 WFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFS 86 Query: 19 DAGNG 5 DAG+G Sbjct: 87 DAGDG 91 >ref|XP_002264931.1| PREDICTED: DNA repair protein XRCC4-like [Vitis vinifera] Length = 166 Score = 109 bits (272), Expect = 3e-22 Identities = 48/65 (73%), Positives = 53/65 (81%) Frame = -2 Query: 199 WFNSHFHLSITDGLHAWTCHATEAEVRLRAEQWDQPVSDYLALVERYLGVQQPGSCYAFE 20 WF SHFHLSITD LH W C+A+E EVR RA QWDQPVSDY+AL ER+LG QQPGS Y F Sbjct: 27 WFPSHFHLSITDSLHTWLCNASEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFS 86 Query: 19 DAGNG 5 DAG+G Sbjct: 87 DAGDG 91 >ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus] gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus] Length = 233 Score = 106 bits (264), Expect = 2e-21 Identities = 49/65 (75%), Positives = 51/65 (78%) Frame = -2 Query: 199 WFNSHFHLSITDGLHAWTCHATEAEVRLRAEQWDQPVSDYLALVERYLGVQQPGSCYAFE 20 W + F LSITDG HAWTCHATE EVRLRA QWDQ SDY+AL ERYLG QQPGS Y F Sbjct: 31 WNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFA 90 Query: 19 DAGNG 5 DAGNG Sbjct: 91 DAGNG 95 >ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis] gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4, putative [Ricinus communis] Length = 265 Score = 104 bits (260), Expect = 7e-21 Identities = 45/64 (70%), Positives = 53/64 (82%) Frame = -2 Query: 199 WFNSHFHLSITDGLHAWTCHATEAEVRLRAEQWDQPVSDYLALVERYLGVQQPGSCYAFE 20 WF+SHFHLSITDGL+AW C+ATE +V+ RA QWDQPVS+Y+ L E YLG QQPGS Y F Sbjct: 32 WFDSHFHLSITDGLNAWVCNATEGQVKERAAQWDQPVSEYINLAEHYLGFQQPGSIYRFA 91 Query: 19 DAGN 8 DAG+ Sbjct: 92 DAGD 95