BLASTX nr result

ID: Dioscorea21_contig00032418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032418
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...    97   2e-18
emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]    97   2e-18
gb|AFK38460.1| unknown [Medicago truncatula]                           95   5e-18
ref|XP_003624255.1| AT-hook DNA-binding protein [Medicago trunca...    95   5e-18
ref|XP_003552472.1| PREDICTED: putative DNA-binding protein ESCA...    94   1e-17

>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 57/96 (59%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = +1

Query: 1   PVIVIGASFTNVAYERLPLEEEDPAAGLQMQQ--PQXXXXXXXXXXXXXXXXXVGNPFPD 174
           PVIVI ASFTNVAYERLPL+EE+P   LQMQQ  PQ                 + NPFPD
Sbjct: 201 PVIVIAASFTNVAYERLPLDEEEP---LQMQQQVPQSSGGGGGG---------INNPFPD 248

Query: 175 PSSGLPFFNLPLNMPQMP-PVDGQGWPASSGGRPSF 279
           PS+GLPFFNLPLNMP    PVD  GW  +SG RP F
Sbjct: 249 PSAGLPFFNLPLNMPNCQLPVD--GWAGNSGARPPF 282


>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 57/96 (59%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = +1

Query: 1   PVIVIGASFTNVAYERLPLEEEDPAAGLQMQQ--PQXXXXXXXXXXXXXXXXXVGNPFPD 174
           PVIVI ASFTNVAYERLPL+EE+P   LQMQQ  PQ                 + NPFPD
Sbjct: 201 PVIVIAASFTNVAYERLPLDEEEP---LQMQQQVPQSSGGGGGG---------INNPFPD 248

Query: 175 PSSGLPFFNLPLNMPQMP-PVDGQGWPASSGGRPSF 279
           PS+GLPFFNLPLNMP    PVD  GW  +SG RP F
Sbjct: 249 PSAGLPFFNLPLNMPNCQLPVD--GWAGNSGARPPF 282


>gb|AFK38460.1| unknown [Medicago truncatula]
          Length = 269

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/93 (59%), Positives = 62/93 (66%)
 Frame = +1

Query: 1   PVIVIGASFTNVAYERLPLEEEDPAAGLQMQQPQXXXXXXXXXXXXXXXXXVGNPFPDPS 180
           PVIVI +SFTNVAYERLPL+E++    LQMQQ Q                 V N FPDPS
Sbjct: 188 PVIVIASSFTNVAYERLPLDEDE---SLQMQQGQSSAGGGGGGGDG-----VNNSFPDPS 239

Query: 181 SGLPFFNLPLNMPQMPPVDGQGWPASSGGRPSF 279
           SGLPFFNLPLNMPQ+ PVD  GW  +SGGR S+
Sbjct: 240 SGLPFFNLPLNMPQL-PVD--GWAGNSGGRQSY 269


>ref|XP_003624255.1| AT-hook DNA-binding protein [Medicago truncatula]
           gi|355499270|gb|AES80473.1| AT-hook DNA-binding protein
           [Medicago truncatula]
          Length = 316

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/93 (59%), Positives = 62/93 (66%)
 Frame = +1

Query: 1   PVIVIGASFTNVAYERLPLEEEDPAAGLQMQQPQXXXXXXXXXXXXXXXXXVGNPFPDPS 180
           PVIVI +SFTNVAYERLPL+E++    LQMQQ Q                 V N FPDPS
Sbjct: 235 PVIVIASSFTNVAYERLPLDEDE---SLQMQQGQSSAGGGGGGGDG-----VNNSFPDPS 286

Query: 181 SGLPFFNLPLNMPQMPPVDGQGWPASSGGRPSF 279
           SGLPFFNLPLNMPQ+ PVD  GW  +SGGR S+
Sbjct: 287 SGLPFFNLPLNMPQL-PVD--GWAGNSGGRQSY 316


>ref|XP_003552472.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 268

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/93 (58%), Positives = 61/93 (65%)
 Frame = +1

Query: 1   PVIVIGASFTNVAYERLPLEEEDPAAGLQMQQPQXXXXXXXXXXXXXXXXXVGNPFPDPS 180
           PVIVI +SFTNVAYERLPL+EE+    +QMQQ Q                   N FPDPS
Sbjct: 187 PVIVIASSFTNVAYERLPLDEEE---SMQMQQGQSSAGGGGSGGGVS-----NNSFPDPS 238

Query: 181 SGLPFFNLPLNMPQMPPVDGQGWPASSGGRPSF 279
           SGLPFFNLPLNMPQ+ PVD  GW  +SGGR S+
Sbjct: 239 SGLPFFNLPLNMPQL-PVD--GWAGNSGGRQSY 268


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