BLASTX nr result

ID: Dioscorea21_contig00032416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032416
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV57294.1| senescence-inducible chloroplast non-yellowing pr...   212   4e-53
gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum]         206   2e-51
ref|XP_002867744.1| hypothetical protein ARALYDRAFT_492573 [Arab...   206   3e-51
gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249...   205   4e-51
ref|NP_001234723.1| senescence-inducible chloroplast stay-green ...   204   6e-51

>gb|ADV57294.1| senescence-inducible chloroplast non-yellowing protein 1 [Festuca
           arundinacea]
          Length = 277

 Score =  212 bits (539), Expect = 4e-53
 Identities = 110/181 (60%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
 Frame = +2

Query: 35  MGFTSALCHLTPYSEMKTRSSSLIYGNKKP-----KRTTSTSPIARLFGPSIFEASKLKV 199
           M   ++   L P S++K       YG         +R     P ARLFGP+IFEASKLKV
Sbjct: 1   MATAASTMSLLPLSQLKQLQQQRRYGGASSVLVLGRRKRFVVPRARLFGPAIFEASKLKV 60

Query: 200 LFVGIHEKKNKXXXXXXXXXXXXHSDVTSHLTLAISHTIHHPQLQGWYHWLQRDEVVAEW 379
           LFVG+ E+ +K            HSDVT+ LTLA+SHTIH  QLQGWY+ LQRDEVVAEW
Sbjct: 61  LFVGVEEENSKHPGKLPRTYTLTHSDVTARLTLAVSHTIHAAQLQGWYNRLQRDEVVAEW 120

Query: 380 KKVRGEMSLHVHCHISGGHFLLNLFASFRHYIFSKELPVVLKAFVHGDESLFSTYPELEH 559
           KKVRG MSLHVHCHISGGHFLL+L A  R+YIF KELPVVLKAFVHGD SLFS++PELE 
Sbjct: 121 KKVRGAMSLHVHCHISGGHFLLDLIAPLRYYIFRKELPVVLKAFVHGDGSLFSSHPELEE 180

Query: 560 A 562
           A
Sbjct: 181 A 181


>gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51
 Identities = 106/160 (66%), Positives = 125/160 (78%), Gaps = 1/160 (0%)
 Frame = +2

Query: 89  RSSSLIYGNK-KPKRTTSTSPIARLFGPSIFEASKLKVLFVGIHEKKNKXXXXXXXXXXX 265
           +SS  IY  + K  +  S  P+ARLFGP+IFEASKLKVLF+G+ EKK+            
Sbjct: 19  QSSIFIYKTRRKSNKNQSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKRPRTYTLT- 77

Query: 266 XHSDVTSHLTLAISHTIHHPQLQGWYHWLQRDEVVAEWKKVRGEMSLHVHCHISGGHFLL 445
            HSDVTS LTLAIS TI++ QLQGWY+ LQRDEVVAEWKKV+G+MSLHVHCHISGGHFLL
Sbjct: 78  -HSDVTSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLL 136

Query: 446 NLFASFRHYIFSKELPVVLKAFVHGDESLFSTYPELEHAL 565
           +LFA  R+YIF KELPVVLKAFVHGD++L + YPEL+ AL
Sbjct: 137 DLFARLRYYIFCKELPVVLKAFVHGDKNLLNNYPELQEAL 176


>ref|XP_002867744.1| hypothetical protein ARALYDRAFT_492573 [Arabidopsis lyrata subsp.
           lyrata] gi|297313580|gb|EFH44003.1| hypothetical protein
           ARALYDRAFT_492573 [Arabidopsis lyrata subsp. lyrata]
          Length = 267

 Score =  206 bits (523), Expect = 3e-51
 Identities = 105/168 (62%), Positives = 132/168 (78%), Gaps = 3/168 (1%)
 Frame = +2

Query: 71  YSEMKTRSSS--LIYGNKKPKRTT-STSPIARLFGPSIFEASKLKVLFVGIHEKKNKXXX 241
           YS+ ++ SSS  L + N++ K+   S  P+ARLFGP+IFE+SKLKVLF+G+ EKK+    
Sbjct: 18  YSDKRSNSSSSLLFFTNRRSKKKNQSIVPVARLFGPAIFESSKLKVLFLGVDEKKHPSTL 77

Query: 242 XXXXXXXXXHSDVTSHLTLAISHTIHHPQLQGWYHWLQRDEVVAEWKKVRGEMSLHVHCH 421
                    HSD+T+ LTLAISH+I++ QLQGW + L RDEVVAEWKKV+G+MSLHVHCH
Sbjct: 78  PRTYTLT--HSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWKKVKGKMSLHVHCH 135

Query: 422 ISGGHFLLNLFASFRHYIFSKELPVVLKAFVHGDESLFSTYPELEHAL 565
           ISGGHFLL+LFA FR++IF KELPVVLKAFVHGD +L +TYPEL+ AL
Sbjct: 136 ISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNTYPELQEAL 183


>gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249|emb|CAN88917.2|
           chlorophyll retainer (stay green) [Capsicum annuum]
           gi|171903868|gb|ACB56586.1| chlorophyll retainer
           [Capsicum annuum]
          Length = 266

 Score =  205 bits (522), Expect = 4e-51
 Identities = 104/159 (65%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
 Frame = +2

Query: 92  SSSLIYGNK-KPKRTTSTSPIARLFGPSIFEASKLKVLFVGIHEKKNKXXXXXXXXXXXX 268
           SS  +Y  + K  +  S  P+ARLFGP+IFEASKLKVLF+G+ EKK+             
Sbjct: 20  SSLFVYKTRRKSHKNQSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLT-- 77

Query: 269 HSDVTSHLTLAISHTIHHPQLQGWYHWLQRDEVVAEWKKVRGEMSLHVHCHISGGHFLLN 448
           HSD+TS LTLAIS TI++ QLQGWY+ LQRDEVVAEWKKV+G+MSLHVHCHISGGHF+L+
Sbjct: 78  HSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLD 137

Query: 449 LFASFRHYIFSKELPVVLKAFVHGDESLFSTYPELEHAL 565
           LFA  R+YIF KELPVVLKAFVHGDE+L   YPEL+ AL
Sbjct: 138 LFARLRYYIFCKELPVVLKAFVHGDENLLKNYPELQQAL 176


>ref|NP_001234723.1| senescence-inducible chloroplast stay-green protein 1 [Solanum
           lycopersicum] gi|68510418|gb|AAY98500.1|
           senescence-inducible chloroplast stay-green protein 1
           [Solanum lycopersicum] gi|171903870|gb|ACB56587.1| green
           flesh protein [Solanum lycopersicum]
           gi|257480000|gb|ACV60215.1| green flesh protein [Solanum
           lycopersicum]
          Length = 272

 Score =  204 bits (520), Expect = 6e-51
 Identities = 105/167 (62%), Positives = 127/167 (76%), Gaps = 3/167 (1%)
 Frame = +2

Query: 74  SEMKTRSSSLIYGNK---KPKRTTSTSPIARLFGPSIFEASKLKVLFVGIHEKKNKXXXX 244
           S++     S I+ +K   K K+  S  P+ARLFGP+IFEASKLKVLF+G+ E+K+     
Sbjct: 12  SKLNNEQQSSIFIHKTRRKCKKNQSIVPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLP 71

Query: 245 XXXXXXXXHSDVTSHLTLAISHTIHHPQLQGWYHWLQRDEVVAEWKKVRGEMSLHVHCHI 424
                   HSD+TS LTLAIS TI++ QLQGWY+ LQRDEVVAEWKKV+G+MSLHVHCHI
Sbjct: 72  RTYTLT--HSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHI 129

Query: 425 SGGHFLLNLFASFRHYIFSKELPVVLKAFVHGDESLFSTYPELEHAL 565
           SGGHF+L+LFA  R+YIF KELPVVLKAFVHGDE+L   YPEL+ AL
Sbjct: 130 SGGHFMLDLFARLRNYIFCKELPVVLKAFVHGDENLLRNYPELQEAL 176


Top