BLASTX nr result

ID: Dioscorea21_contig00032392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032392
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304316.1| GRAS family transcription factor [Populus tr...   186   2e-45
ref|XP_003608476.1| GRAS family transcription factor [Medicago t...   183   1e-44
ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis ...   182   2e-44
emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]   182   2e-44
ref|XP_004166166.1| PREDICTED: scarecrow-like protein 32-like [C...   179   2e-43

>ref|XP_002304316.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841748|gb|EEE79295.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 451

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/155 (58%), Positives = 115/155 (74%), Gaps = 15/155 (9%)
 Frame = +1

Query: 1   SRNIGMEFRVIPSDFSQGFDTLIEQLRAEQMVC--DGEALVVNCQMMLHYVPEETVN--- 165
           SRNI MEFRVIPS ++ GF + IEQLR + +V    GEALV+NC MMLHY+PEET++   
Sbjct: 223 SRNIIMEFRVIPSSYADGFSSFIEQLRVQHLVYAESGEALVINCHMMLHYIPEETLSGIP 282

Query: 166 ----------HEISHLSMRSCCLKAIRSLEPTIITLVEEDADFTDSDLVGRLRSAFNFLW 315
                        S +S R+  LK++RSL+PT++ LV+EDAD T ++LV RLRSAFN+LW
Sbjct: 283 STNSNTYSYESSSSSMSFRTMFLKSLRSLDPTLVVLVDEDADLTSNNLVCRLRSAFNYLW 342

Query: 316 IPYDAVETFLPKGSDQRRWYEGGVCWKIENVIAHE 420
           IPYD V+TFLP+GS QR+WYE  +CWKIENVIAHE
Sbjct: 343 IPYDTVDTFLPRGSRQRQWYEADICWKIENVIAHE 377


>ref|XP_003608476.1| GRAS family transcription factor [Medicago truncatula]
           gi|355509531|gb|AES90673.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 470

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/158 (53%), Positives = 115/158 (72%), Gaps = 18/158 (11%)
 Frame = +1

Query: 1   SRNIGMEFRVIPSDFSQGFDTLIEQLRAEQMVCDGEALVVNCQMMLHYVPEETVNHEISH 180
           SRN+ +EFRV+ S ++ GF +LIE LR +++V  GEALV+NC MMLHY+P+ET+++  S+
Sbjct: 239 SRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSNSNSY 298

Query: 181 L------------------SMRSCCLKAIRSLEPTIITLVEEDADFTDSDLVGRLRSAFN 306
           +                  S+RS  L A+R L+PT++ LV+ED D T ++LV RLRSAFN
Sbjct: 299 VYDSMSSTTTATTITTTTTSLRSLFLNALRGLDPTLVILVDEDVDLTSNNLVSRLRSAFN 358

Query: 307 FLWIPYDAVETFLPKGSDQRRWYEGGVCWKIENVIAHE 420
           +LWIPYD V+TFLP+GS QR+WYE  +CWKIENVIAHE
Sbjct: 359 YLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHE 396


>ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis vinifera]
          Length = 454

 Score =  182 bits (462), Expect = 2e-44
 Identities = 91/154 (59%), Positives = 115/154 (74%), Gaps = 14/154 (9%)
 Frame = +1

Query: 1   SRNIGMEFRVIPSDFSQGFDTLIEQLRAEQMVC--DGEALVVNCQMMLHYVPEETVN--H 168
           SRN+ +EFRVIPS  S GF +LI+QLR + +V    GEAL+VNC MMLHY+PEET++  H
Sbjct: 227 SRNVMLEFRVIPSTSSDGFSSLIDQLRVQHLVYAESGEALIVNCHMMLHYIPEETLSAIH 286

Query: 169 EISHLSM----------RSCCLKAIRSLEPTIITLVEEDADFTDSDLVGRLRSAFNFLWI 318
             +  S           R+  LKA+R+L PTI+ LV+EDADFT ++LV RLRSAFN+LWI
Sbjct: 287 STNSSSYSVESSSPSYHRTMFLKALRTLNPTIVILVDEDADFTSNNLVCRLRSAFNYLWI 346

Query: 319 PYDAVETFLPKGSDQRRWYEGGVCWKIENVIAHE 420
           PYD ++TFLP+GS QR+WYE  +CWKIENVIAHE
Sbjct: 347 PYDTMDTFLPRGSKQRQWYEADICWKIENVIAHE 380


>emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]
          Length = 455

 Score =  182 bits (462), Expect = 2e-44
 Identities = 91/154 (59%), Positives = 115/154 (74%), Gaps = 14/154 (9%)
 Frame = +1

Query: 1   SRNIGMEFRVIPSDFSQGFDTLIEQLRAEQMVC--DGEALVVNCQMMLHYVPEETVN--H 168
           SRN+ +EFRVIPS  S GF +LI+QLR + +V    GEAL+VNC MMLHY+PEET++  H
Sbjct: 228 SRNVMLEFRVIPSTSSDGFSSLIDQLRVQHLVYAESGEALIVNCHMMLHYIPEETLSAIH 287

Query: 169 EISHLSM----------RSCCLKAIRSLEPTIITLVEEDADFTDSDLVGRLRSAFNFLWI 318
             +  S           R+  LKA+R+L PTI+ LV+EDADFT ++LV RLRSAFN+LWI
Sbjct: 288 STNSSSYSVESSSPSYHRTMFLKALRTLNPTIVILVDEDADFTSNNLVCRLRSAFNYLWI 347

Query: 319 PYDAVETFLPKGSDQRRWYEGGVCWKIENVIAHE 420
           PYD ++TFLP+GS QR+WYE  +CWKIENVIAHE
Sbjct: 348 PYDTMDTFLPRGSKQRQWYEADICWKIENVIAHE 381


>ref|XP_004166166.1| PREDICTED: scarecrow-like protein 32-like [Cucumis sativus]
          Length = 473

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/153 (57%), Positives = 112/153 (73%), Gaps = 13/153 (8%)
 Frame = +1

Query: 1   SRNIGMEFRVIPSDFSQGFDTLIEQLRAEQMVC---DGEALVVNCQMMLHYVPEETVNHE 171
           S+N+ MEFRV+PS  + GF  LIEQ+R + ++    + EALV NC MMLHY+PEET+N  
Sbjct: 247 SKNVTMEFRVVPSCHTDGFARLIEQIRVQHLIYGPENNEALVFNCHMMLHYIPEETLNPN 306

Query: 172 ----------ISHLSMRSCCLKAIRSLEPTIITLVEEDADFTDSDLVGRLRSAFNFLWIP 321
                      S  S+RS  LKA+RSL+PTI+ LV+EDADFT + LV RLRSAFN+LWIP
Sbjct: 307 PNPSPNFDISSSSSSIRSMFLKAVRSLDPTIVVLVDEDADFTSTKLVTRLRSAFNYLWIP 366

Query: 322 YDAVETFLPKGSDQRRWYEGGVCWKIENVIAHE 420
           YD++++FLP+ S QR WYE  +CWKIENVIAHE
Sbjct: 367 YDSMDSFLPRSSKQREWYEADICWKIENVIAHE 399


Top