BLASTX nr result

ID: Dioscorea21_contig00032384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032384
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38862.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
gb|AFK47264.1| unknown [Lotus japonicus]                              123   2e-26
ref|XP_003623723.1| Pentatricopeptide repeat-containing protein ...   122   4e-26
dbj|BAJ85759.1| predicted protein [Hordeum vulgare subsp. vulgare]    122   4e-26

>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/94 (69%), Positives = 77/94 (81%)
 Frame = +3

Query: 6   MSILLASWVKTMKPIRADWLSVMKEMRRLGNPLLLEVMEFALLEDSFEANIRDYTKLIDM 185
           +S LLA+WVK MKP RADWLSV+KE+ RL +PLLLEV E ALLE+SFEANIRDYTK+ID 
Sbjct: 54  LSDLLAAWVKIMKPRRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDG 113

Query: 186 YAKHSMLQNAENIFQAMKERGFTCDQVTLTVLVH 287
           Y K + LQ+AEN   AMK RGF CDQVTLT +++
Sbjct: 114 YGKQNRLQDAENTLSAMKRRGFICDQVTLTAMIN 147


>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Vitis vinifera]
          Length = 352

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/94 (69%), Positives = 77/94 (81%)
 Frame = +3

Query: 6   MSILLASWVKTMKPIRADWLSVMKEMRRLGNPLLLEVMEFALLEDSFEANIRDYTKLIDM 185
           +S LLA+WVK MKP RADWLSV+KE+ RL +PLLLEV E ALLE+SFEANIRDYTK+ID 
Sbjct: 54  LSDLLAAWVKIMKPRRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDG 113

Query: 186 YAKHSMLQNAENIFQAMKERGFTCDQVTLTVLVH 287
           Y K + LQ+AEN   AMK RGF CDQVTLT +++
Sbjct: 114 YGKQNRLQDAENTLSAMKRRGFICDQVTLTAMIN 147


>gb|AFK47264.1| unknown [Lotus japonicus]
          Length = 414

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/94 (62%), Positives = 72/94 (76%)
 Frame = +3

Query: 6   MSILLASWVKTMKPIRADWLSVMKEMRRLGNPLLLEVMEFALLEDSFEANIRDYTKLIDM 185
           +S LL +WVK MKPIRA+WLSV+KE+  + +PL LEV E ALLE+SFE NIRDYT +I  
Sbjct: 121 VSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHY 180

Query: 186 YAKHSMLQNAENIFQAMKERGFTCDQVTLTVLVH 287
             KH+ L+ AENI  AMK+RGF CDQV LT +VH
Sbjct: 181 CGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214


>ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498738|gb|AES79941.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/91 (61%), Positives = 72/91 (79%)
 Frame = +3

Query: 15  LLASWVKTMKPIRADWLSVMKEMRRLGNPLLLEVMEFALLEDSFEANIRDYTKLIDMYAK 194
           +L +WV+ MKP RADWLSV+KE++ + +PL LEV E AL+E+SFE N+RDYTKLI  Y+K
Sbjct: 134 VLRAWVEIMKPTRADWLSVLKELKNMDHPLYLEVAEHALVEESFEPNLRDYTKLIHYYSK 193

Query: 195 HSMLQNAENIFQAMKERGFTCDQVTLTVLVH 287
            + L+ AENIF  MK+RGF CDQV LT +VH
Sbjct: 194 ENQLEAAENIFTLMKQRGFICDQVILTTMVH 224


>dbj|BAJ85759.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 454

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/93 (61%), Positives = 71/93 (76%)
 Frame = +3

Query: 6   MSILLASWVKTMKPIRADWLSVMKEMRRLGNPLLLEVMEFALLEDSFEANIRDYTKLIDM 185
           + ++LA WVK MKP RADWL V+KE+  + +PLL EV+E+ LLEDSFEAN+RDYTKLI +
Sbjct: 102 LGVVLAFWVKAMKPKRADWLLVLKELMAMESPLLAEVLEYVLLEDSFEANVRDYTKLIQI 161

Query: 186 YAKHSMLQNAENIFQAMKERGFTCDQVTLTVLV 284
           Y K ++L+ AE  F AMK RG  CDQV LT LV
Sbjct: 162 YGKQNLLREAEEAFHAMKARGLPCDQVMLTALV 194


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