BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032363
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   102   4e-20
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...    99   4e-19

>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/130 (56%), Positives = 92/130 (70%)
 Frame = +1

Query: 58  IPLIKSCSSKPHLIQIHALLLRTALFQESSVSVAFLSRAALPPFHDLKYSKIVFDQITKP 237
           I LIKSCS K HL+QIHA ++RT+L Q   +S+ FLSRAAL P  D+ YS  VF QI KP
Sbjct: 72  ISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKP 131

Query: 238 CIVHYNIMIRAFSQSDSPKKAFDFYQLMRRNGINGNRFSSSFVLKSCAKIPTLCGGKQVH 417
               YN+MIRA+S S SP++ F  Y+ MRR G+  N  SSSFV+KSC +I +L GG Q+H
Sbjct: 132 SGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIH 191

Query: 418 CRILQDGQQS 447
            RIL+DG QS
Sbjct: 192 ARILRDGHQS 201


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/130 (51%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  IPLIKSCSSKPHLIQIHALLLRTALFQESSVSVAFLSRAALP-PFHDLKYSKIVFDQITK 234
           I  IKS S K  L+QIHA ++RT L Q  +VS+ FLSR AL  P  D  YS+  F Q++ 
Sbjct: 7   ISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSH 66

Query: 235 PCIVHYNIMIRAFSQSDSPKKAFDFYQLMRRNGINGNRFSSSFVLKSCAKIPTLCGGKQV 414
           P + HYN MIRA S SDSP+K    Y+ MRR GI  +  SSSF +KSC +   L GG QV
Sbjct: 67  PLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQV 126

Query: 415 HCRILQDGQQ 444
           HC I +DG Q
Sbjct: 127 HCNIFKDGHQ 136


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/130 (46%), Positives = 84/130 (64%)
 Frame = +1

Query: 58  IPLIKSCSSKPHLIQIHALLLRTALFQESSVSVAFLSRAALPPFHDLKYSKIVFDQITKP 237
           I LIKSC+ K  L+QIHA ++ T+  Q+  VS+ FL+R A  PF DL YS+ +FD +T P
Sbjct: 31  ISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTNP 90

Query: 238 CIVHYNIMIRAFSQSDSPKKAFDFYQLMRRNGINGNRFSSSFVLKSCAKIPTLCGGKQVH 417
            + HYN M+RA+S S SP +    Y+ M R G+  +  SSSF +KSC K+ +L  G Q+H
Sbjct: 91  FVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIH 150

Query: 418 CRILQDGQQS 447
            RI  +G Q+
Sbjct: 151 ARIFINGHQA 160


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  102 bits (253), Expect = 4e-20
 Identities = 62/129 (48%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
 Frame = +1

Query: 58  IPLIKSCSSKPHLIQIHALLLRTALFQESSVSVAFLSRAALPPF-HDLKYSKIVFDQITK 234
           + LI S + K HL QIHALLLRT+L + S V   FLSR AL     D+ YS  VF Q   
Sbjct: 15  LSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLN 74

Query: 235 PCIVHYNIMIRAFSQSDSPKKAFDFYQLMRRN-GINGNRFSSSFVLKSCAKIPTLCGGKQ 411
           P + H N MIRAFS S +P + F  ++ +RRN  +  N  SSSF LK C K   L GG Q
Sbjct: 75  PTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ 134

Query: 412 VHCRILQDG 438
           +H +I  DG
Sbjct: 135 IHGKIFSDG 143


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 60/129 (46%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
 Frame = +1

Query: 58  IPLIKSCSSKPHLIQIHALLLRTALFQESSVSVAFLSRAALPPF-HDLKYSKIVFDQITK 234
           + LI S + K HL QIHA+LLRT+L + S V   F SR AL     D+ YS  VF Q   
Sbjct: 15  LSLIVSSTGKLHLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQRLN 74

Query: 235 PCIVHYNIMIRAFSQSDSPKKAFDFYQLMRRN-GINGNRFSSSFVLKSCAKIPTLCGGKQ 411
           P + H N MIRAFS S +P + F  ++ +RRN     N  SSSF LK C K   L GG Q
Sbjct: 75  PTLSHCNTMIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQ 134

Query: 412 VHCRILQDG 438
           +H +I  DG
Sbjct: 135 IHGKIFSDG 143