BLASTX nr result

ID: Dioscorea21_contig00032352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032352
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272941.1| PREDICTED: uncharacterized protein LOC100257...    94   9e-18
ref|XP_002523132.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_002320995.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
gb|ABR17880.1| unknown [Picea sitchensis]                              81   8e-14
ref|XP_001752677.1| predicted protein [Physcomitrella patens sub...    81   1e-13

>ref|XP_002272941.1| PREDICTED: uncharacterized protein LOC100257315 [Vitis vinifera]
           gi|297743927|emb|CBI36897.3| unnamed protein product
           [Vitis vinifera]
          Length = 323

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/69 (60%), Positives = 44/69 (63%)
 Frame = +2

Query: 20  PLDPTGIYFILTAGDVAVERFCMGSCGFHAGYXXXXXXXXXXXXAHVGDPGQQCPGTCAW 199
           P D  G+Y  LTA DV VERFC GSCGFH               AHVGDPG QCPG CAW
Sbjct: 153 PFDSNGVYLFLTAKDVVVERFCSGSCGFHENMVVSPRGRVVY--AHVGDPGTQCPGLCAW 210

Query: 200 PYAVPAYGP 226
           PYA+PAYGP
Sbjct: 211 PYAIPAYGP 219


>ref|XP_002523132.1| conserved hypothetical protein [Ricinus communis]
           gi|223537694|gb|EEF39317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/70 (57%), Positives = 46/70 (65%)
 Frame = +2

Query: 17  LPLDPTGIYFILTAGDVAVERFCMGSCGFHAGYXXXXXXXXXXXXAHVGDPGQQCPGTCA 196
           LP+D  GIY ++T+ DV VE+FCMGSCGFH               AHVGD   QCPG CA
Sbjct: 147 LPVDYNGIYLVMTSKDVIVEKFCMGSCGFHE--TSVGPSNKRLVYAHVGD-SSQCPGLCA 203

Query: 197 WPYAVPAYGP 226
           WPYA+PAYGP
Sbjct: 204 WPYAIPAYGP 213


>ref|XP_002320995.1| predicted protein [Populus trichocarpa] gi|222861768|gb|EEE99310.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/75 (53%), Positives = 46/75 (61%)
 Frame = +2

Query: 2   ISKGSLPLDPTGIYFILTAGDVAVERFCMGSCGFHAGYXXXXXXXXXXXXAHVGDPGQQC 181
           +    LP+D   IY +LTA DV+VE+FCM SCGFH               AHVGD   QC
Sbjct: 149 VISNKLPVDSNAIYLVLTAKDVSVEKFCMDSCGFHDS-VLVTPKGSVIVYAHVGD-AVQC 206

Query: 182 PGTCAWPYAVPAYGP 226
           PG CAWPYA+PAYGP
Sbjct: 207 PGFCAWPYALPAYGP 221


>gb|ABR17880.1| unknown [Picea sitchensis]
          Length = 336

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +2

Query: 20  PLDPTGIYFILTAGDVAVERFCMGSCGFHAGY-XXXXXXXXXXXXAHVGDPGQQCPGTCA 196
           P+D  GIY +LTA DV VERFCM SCGFH                A VG+ G QCPG CA
Sbjct: 161 PIDAKGIYIVLTAADVYVERFCMDSCGFHDSIPITNSKSASKILLAWVGNSGVQCPGQCA 220

Query: 197 WPYAVPAYGP 226
           WP+A P YGP
Sbjct: 221 WPFAAPLYGP 230


>ref|XP_001752677.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162696208|gb|EDQ82548.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 300

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 5   SKGSLPLDPTGIYFILTAGDVAVERFCMGSCGFHA-GYXXXXXXXXXXXXAHVGDPGQQC 181
           S  +LP DP  IYF+LTA DVAVE FCM +C  H+               + VG+ G QC
Sbjct: 120 SLATLPADPASIYFVLTAADVAVEDFCMNTCASHSFTPATASSKNFMLPYSWVGNSGDQC 179

Query: 182 PGTCAWPYAVPAYGP 226
           PG CAWPYA+P YGP
Sbjct: 180 PGQCAWPYALPQYGP 194


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