BLASTX nr result

ID: Dioscorea21_contig00032254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032254
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_003622645.1| hypothetical protein MTR_7g050300 [Medicago ...    82   3e-14
ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp....    78   6e-13
dbj|BAK04868.1| predicted protein [Hordeum vulgare subsp. vulgare]     77   1e-12
ref|XP_002468057.1| hypothetical protein SORBIDRAFT_01g038830 [S...    75   4e-12

>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 RVLSPES-GGTLLLLALAHPFSHYDRILRKMGCNLSSQRENNRLQFMDMLRLEFPGQIDG 102
           R LS +S   T++ LA +HP SHYDRILRK+GCNL +QREN R  F DML+L  P + +G
Sbjct: 49  RTLSSQSPNNTVIFLAFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEG 108

Query: 101 ETKEVGFQELFSKLQAAIEVIGERGNNDGGITI 3
           +T + GF  L+ K+Q  I  + E   N   I I
Sbjct: 109 KTGKGGFTALYWKIQNTICALPENNKNHATIMI 141


>ref|XP_003622645.1| hypothetical protein MTR_7g050300 [Medicago truncatula]
           gi|355497660|gb|AES78863.1| hypothetical protein
           MTR_7g050300 [Medicago truncatula]
          Length = 254

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/80 (46%), Positives = 57/80 (71%)
 Frame = -2

Query: 278 RVLSPESGGTLLLLALAHPFSHYDRILRKMGCNLSSQRENNRLQFMDMLRLEFPGQIDGE 99
           R  S     +++ LAL+HPFSHYDR+LRK+GCNL++QR+NN+  F+DML L+F  Q +G+
Sbjct: 47  RSFSSHPSSSVIFLALSHPFSHYDRVLRKIGCNLAAQRDNNKFFFIDMLMLQF--QDEGK 104

Query: 98  TKEVGFQELFSKLQAAIEVI 39
               GF  +F K+++ I+ +
Sbjct: 105 PNHNGFAAVFEKIESVIKAL 124


>ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318326|gb|EFH48748.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/92 (43%), Positives = 55/92 (59%)
 Frame = -2

Query: 278 RVLSPESGGTLLLLALAHPFSHYDRILRKMGCNLSSQRENNRLQFMDMLRLEFPGQIDGE 99
           RVLSP S   L+ LA A PFSHYDRILRK+GCNL++ + NNRL F DML ++     + E
Sbjct: 49  RVLSPNSSDALIFLAFARPFSHYDRILRKLGCNLATHKTNNRLVFFDMLMIKCSDSEEME 108

Query: 98  TKEVGFQELFSKLQAAIEVIGERGNNDGGITI 3
                  +LF ++Q  +  +  +    G IT+
Sbjct: 109 DNVSAVAKLFREIQETVRKL--QSVTSGNITV 138


>dbj|BAK04868.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 250

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/86 (48%), Positives = 51/86 (59%)
 Frame = -2

Query: 260 SGGTLLLLALAHPFSHYDRILRKMGCNLSSQRENNRLQFMDMLRLEFPGQIDGETKEVGF 81
           +GG   LLALAHPFSHYDR+LRKMGCNLS  R++ RL F D+    FPG   G       
Sbjct: 45  AGGGAALLALAHPFSHYDRVLRKMGCNLSVHRKSERLHFFDL--QAFPGGTRGGVIADSL 102

Query: 80  QELFSKLQAAIEVIGERGNNDGGITI 3
            +L+S LQ  +E     G N G  T+
Sbjct: 103 AQLYSGLQRVVEAY-RTGENAGRFTV 127


>ref|XP_002468057.1| hypothetical protein SORBIDRAFT_01g038830 [Sorghum bicolor]
           gi|241921911|gb|EER95055.1| hypothetical protein
           SORBIDRAFT_01g038830 [Sorghum bicolor]
          Length = 249

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/86 (47%), Positives = 51/86 (59%)
 Frame = -2

Query: 260 SGGTLLLLALAHPFSHYDRILRKMGCNLSSQRENNRLQFMDMLRLEFPGQIDGETKEVGF 81
           SGG    LALA PFSHYDR+LRKMGCNLS  R N RL F ++  L FPG     T    F
Sbjct: 45  SGGAAAFLALAQPFSHYDRVLRKMGCNLSLHRRNERLHFFEL--LGFPGGAREGTIADRF 102

Query: 80  QELFSKLQAAIEVIGERGNNDGGITI 3
            +L++++Q  +E     G N G  T+
Sbjct: 103 VQLYNEIQRLVEA-NRTGENAGQFTV 127


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