BLASTX nr result

ID: Dioscorea21_contig00032245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032245
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF30983.1| basic helix-loop-helix protein [Nicotiana tabacum]     70   2e-10
dbj|BAF30984.1| basic helix-loop-helix protein [Nicotiana tabacum]     70   2e-10
ref|NP_199178.1| transcription factor bHLH92 [Arabidopsis thalia...    67   2e-09
ref|XP_002311662.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002862509.1| basic helix-loop-helix family protein [Arabi...    64   2e-08

>dbj|BAF30983.1| basic helix-loop-helix protein [Nicotiana tabacum]
          Length = 221

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/88 (42%), Positives = 55/88 (62%)
 Frame = +3

Query: 93  EEAKIEVQLMNPVSTIDSMIEALQCMKGMGVKAMSIHSEFYGDEFTTMMTINTKVEKSEV 272
           E+AKI+V++  P+  IDSM+E L+C+K  G KA +I S F   EF++++ I TK+  +EV
Sbjct: 132 EKAKIKVKINYPIYGIDSMLEVLKCLKNCGTKANAIQSSFSQQEFSSILEIETKIGAAEV 191

Query: 273 GRAVEGTPVEMERKMRLQLQRRGVWATT 356
            +AV+ T  E ER  R   Q    W T+
Sbjct: 192 EKAVQNTLFETERNFRAH-QLPMTWLTS 218


>dbj|BAF30984.1| basic helix-loop-helix protein [Nicotiana tabacum]
          Length = 247

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/88 (42%), Positives = 55/88 (62%)
 Frame = +3

Query: 93  EEAKIEVQLMNPVSTIDSMIEALQCMKGMGVKAMSIHSEFYGDEFTTMMTINTKVEKSEV 272
           E+AKI+V++  P+  IDSM+E L+C+K  G KA +I S F   EF++++ I TK+  +EV
Sbjct: 158 EKAKIKVKINYPIYGIDSMLEVLKCLKNCGTKANAIQSSFSQQEFSSILEIETKIGAAEV 217

Query: 273 GRAVEGTPVEMERKMRLQLQRRGVWATT 356
            +AV+ T  E ER  R   Q    W T+
Sbjct: 218 EKAVQNTLFETERNFRAH-QLPMTWLTS 244


>ref|NP_199178.1| transcription factor bHLH92 [Arabidopsis thaliana]
           gi|75309129|sp|Q9FIX5.1|BH092_ARATH RecName:
           Full=Transcription factor bHLH92; AltName: Full=Basic
           helix-loop-helix protein 92; Short=AtbHLH92; Short=bHLH
           92; AltName: Full=Transcription factor EN 22; AltName:
           Full=bHLH transcription factor bHLH092
           gi|10178204|dbj|BAB11628.1| unnamed protein product
           [Arabidopsis thaliana] gi|17529208|gb|AAL38831.1|
           unknown protein [Arabidopsis thaliana]
           gi|20466035|gb|AAM20352.1| unknown protein [Arabidopsis
           thaliana] gi|332007608|gb|AED94991.1| transcription
           factor bHLH92 [Arabidopsis thaliana]
          Length = 247

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/86 (39%), Positives = 49/86 (56%)
 Frame = +3

Query: 60  EHEMKDDNMSIEEAKIEVQLMNPVSTIDSMIEALQCMKGMGVKAMSIHSEFYGDEFTTMM 239
           E   KD +  + E K+ V L  P+S +DSM+EAL  +K MG K  ++H+ F   EF+  M
Sbjct: 150 EKSAKDGHDEMSETKVRVNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATM 209

Query: 240 TINTKVEKSEVGRAVEGTPVEMERKM 317
           TI T++   EV + VE    E E K+
Sbjct: 210 TIETQIRGEEVEKRVERRLQETEWKL 235


>ref|XP_002311662.1| predicted protein [Populus trichocarpa] gi|222851482|gb|EEE89029.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/69 (40%), Positives = 44/69 (63%)
 Frame = +3

Query: 87  SIEEAKIEVQLMNPVSTIDSMIEALQCMKGMGVKAMSIHSEFYGDEFTTMMTINTKVEKS 266
           ++E  KI +++ NP S +D MI+ L+C+K +G K  SI S+F   E   +M I TK+E +
Sbjct: 231 NVESTKIRIEVANPTSGVDPMIDVLKCLKSLGTKTRSIQSQFSDQELVAVMEIETKIEAA 290

Query: 267 EVGRAVEGT 293
           E+  AV+ T
Sbjct: 291 EIENAVKRT 299


>ref|XP_002862509.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297308072|gb|EFH38767.1| basic
           helix-loop-helix family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 247

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/86 (37%), Positives = 47/86 (54%)
 Frame = +3

Query: 60  EHEMKDDNMSIEEAKIEVQLMNPVSTIDSMIEALQCMKGMGVKAMSIHSEFYGDEFTTMM 239
           E   KDD  ++ E K+   L  P+S +DSM+E L  +K MG K  ++H+ F   EF+  M
Sbjct: 151 EKSAKDDPDNMSETKVRFNLQEPLSGLDSMLEVLHYLKSMGTKLKTVHANFSPQEFSATM 210

Query: 240 TINTKVEKSEVGRAVEGTPVEMERKM 317
            I T++   EV + VE    E E K+
Sbjct: 211 NIETQIRGEEVEKRVERRLQENEWKL 236


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