BLASTX nr result

ID: Dioscorea21_contig00032237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032237
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   187   1e-45
emb|CBI19327.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion pro...   183   1e-44
ref|XP_003523763.1| PREDICTED: multidrug and toxin extrusion pro...   183   1e-44

>ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|222842827|gb|EEE80374.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/120 (76%), Positives = 98/120 (81%)
 Frame = +1

Query: 1   VALAMSXXXXXXXXXXXXXXXVSRVYKDSWVTPCMDCLRGWSALLKLAVPTCISVCLEWW 180
           VA+AM                 S VYKDSWV+P MDCLRGWS+LL LAVPTC+SVCLEWW
Sbjct: 207 VAIAMVWTNLNLFLSLASFIYFSGVYKDSWVSPSMDCLRGWSSLLTLAVPTCVSVCLEWW 266

Query: 181 WYELMIMLCGLLSNPRATVASMGILIQTTALVYVFPSSLSLGVSTRVGNELGANRPAKAR 360
           WYE MIMLCGLL NP+ATVASMGILIQTT+LVYVFPSSLSLGVSTRVGNELGANRPAKAR
Sbjct: 267 WYEFMIMLCGLLINPKATVASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPAKAR 326


>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223550704|gb|EEF52190.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  187 bits (474), Expect = 1e-45
 Identities = 90/120 (75%), Positives = 97/120 (80%)
 Frame = +1

Query: 1   VALAMSXXXXXXXXXXXXXXXVSRVYKDSWVTPCMDCLRGWSALLKLAVPTCISVCLEWW 180
           VA+AM                 S +YKDSWV P MDCLRGWS+LL LAVPTC+SVCLEWW
Sbjct: 206 VAIAMVWTNLNLFLFLISFIYFSGIYKDSWVAPSMDCLRGWSSLLALAVPTCVSVCLEWW 265

Query: 181 WYELMIMLCGLLSNPRATVASMGILIQTTALVYVFPSSLSLGVSTRVGNELGANRPAKAR 360
           WYE MIMLCGLL NP+AT+ASMGILIQTT+LVYVFPSSLSLGVSTRVGNELGANRPAKAR
Sbjct: 266 WYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPAKAR 325


>emb|CBI19327.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/120 (74%), Positives = 97/120 (80%)
 Frame = +1

Query: 1   VALAMSXXXXXXXXXXXXXXXVSRVYKDSWVTPCMDCLRGWSALLKLAVPTCISVCLEWW 180
           VA+AM                 S VYK SWV P +DCLRGWS+LL LAVPTCISVCLEWW
Sbjct: 207 VAIAMVWTNLNLFLLLISFIFFSGVYKGSWVAPSIDCLRGWSSLLALAVPTCISVCLEWW 266

Query: 181 WYELMIMLCGLLSNPRATVASMGILIQTTALVYVFPSSLSLGVSTRVGNELGANRPAKAR 360
           WYE MIMLCGLL+NP+AT+ASMGILIQTT+LVYVFPS+LSLGVSTRVGNELGANRPAKAR
Sbjct: 267 WYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSALSLGVSTRVGNELGANRPAKAR 326


>ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|147802486|emb|CAN77415.1| hypothetical protein
           VITISV_000475 [Vitis vinifera]
          Length = 527

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/120 (74%), Positives = 97/120 (80%)
 Frame = +1

Query: 1   VALAMSXXXXXXXXXXXXXXXVSRVYKDSWVTPCMDCLRGWSALLKLAVPTCISVCLEWW 180
           VA+AM                 S VYK SWV P +DCLRGWS+LL LAVPTCISVCLEWW
Sbjct: 207 VAIAMVWTNLNLFLLLISFIFFSGVYKGSWVAPSIDCLRGWSSLLALAVPTCISVCLEWW 266

Query: 181 WYELMIMLCGLLSNPRATVASMGILIQTTALVYVFPSSLSLGVSTRVGNELGANRPAKAR 360
           WYE MIMLCGLL+NP+AT+ASMGILIQTT+LVYVFPS+LSLGVSTRVGNELGANRPAKAR
Sbjct: 267 WYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSALSLGVSTRVGNELGANRPAKAR 326


>ref|XP_003523763.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 537

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/120 (74%), Positives = 96/120 (80%)
 Frame = +1

Query: 1   VALAMSXXXXXXXXXXXXXXXVSRVYKDSWVTPCMDCLRGWSALLKLAVPTCISVCLEWW 180
           VA+AM                 SRVYKDSWV P  DCLRGWS+LL LAVP C+SVCLEWW
Sbjct: 236 VAIAMVWTNLNLFIFLSSFVYFSRVYKDSWVPPSTDCLRGWSSLLALAVPNCVSVCLEWW 295

Query: 181 WYELMIMLCGLLSNPRATVASMGILIQTTALVYVFPSSLSLGVSTRVGNELGANRPAKAR 360
           WYELMI+LCGLL NP++T+ASMGILIQTTALVYVFPSSLSL VSTRVGNELGANRPAKAR
Sbjct: 296 WYELMIILCGLLLNPKSTIASMGILIQTTALVYVFPSSLSLAVSTRVGNELGANRPAKAR 355


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