BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032234
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              167   8e-40
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   159   2e-37
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   140   8e-32

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/125 (63%), Positives = 99/125 (79%)
 Frame = +3

Query: 3   RNEVSWSSMITSYSQIGMFKEALEVFNEMQLASVKPNQAGIVGALSACGFLGALDQGKWI 182
           +N VSWS+MIT Y+QIG+F+EALE+FN+MQ+A  +PN   IVGAL+AC FLGALDQG+WI
Sbjct: 208 KNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWI 267

Query: 183 HVYVERNGMVLDRILGTALIDMYAKCGCIENALKVFDEMLAKGYVPNSITYNLVIRGLCH 362
           H YV+RN MVLDRILGTALIDMYAKCGC+E A +VFDEML +    +   +  +I GL +
Sbjct: 268 HAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDR----DVFAFTSLISGLAN 323

Query: 363 AGETA 377
            G +A
Sbjct: 324 HGHSA 328


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/125 (63%), Positives = 99/125 (79%)
 Frame = +3

Query: 3   RNEVSWSSMITSYSQIGMFKEALEVFNEMQLASVKPNQAGIVGALSACGFLGALDQGKWI 182
           +N VSWS+MIT Y+QIG+F+EALE+FN+MQ+A  +PN   IVGAL+AC FLGALDQG+WI
Sbjct: 183 KNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWI 242

Query: 183 HVYVERNGMVLDRILGTALIDMYAKCGCIENALKVFDEMLAKGYVPNSITYNLVIRGLCH 362
           H YV+RN MVLDRILGTALIDMYAKCGC+E A +VFDEML +    +   +  +I GL +
Sbjct: 243 HAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDR----DVFAFTSLISGLAN 298

Query: 363 AGETA 377
            G +A
Sbjct: 299 HGHSA 303


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/125 (59%), Positives = 98/125 (78%)
 Frame = +3

Query: 3   RNEVSWSSMITSYSQIGMFKEALEVFNEMQLASVKPNQAGIVGALSACGFLGALDQGKWI 182
           RNEVSWS+MIT Y  +GMF+EALE+FN++QL  ++PN AGIVGAL+AC +LG+LD G+WI
Sbjct: 203 RNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGRWI 262

Query: 183 HVYVERNGMVLDRILGTALIDMYAKCGCIENALKVFDEMLAKGYVPNSITYNLVIRGLCH 362
           H YV+RNG  LDR+LGTAL+DMYAKCGCIE A  VF++M  K    ++  +  +I GL +
Sbjct: 263 HAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDK----DAFAFTSLISGLAN 318

Query: 363 AGETA 377
            G++A
Sbjct: 319 HGQSA 323


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/99 (67%), Positives = 81/99 (81%)
 Frame = +3

Query: 3   RNEVSWSSMITSYSQIGMFKEALEVFNEMQLASVKPNQAGIVGALSACGFLGALDQGKWI 182
           +N VSW ++I  Y +IG FKEALEVF +MQ++  + N+A IVGAL+AC FLGALDQG+WI
Sbjct: 207 KNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWI 266

Query: 183 HVYVERNGMVLDRILGTALIDMYAKCGCIENALKVFDEM 299
           H YV+R+ M LDR+LGTALIDMYAKCGCIE A  VFDEM
Sbjct: 267 HAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEM 305


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/125 (54%), Positives = 90/125 (72%)
 Frame = +3

Query: 3   RNEVSWSSMITSYSQIGMFKEALEVFNEMQLASVKPNQAGIVGALSACGFLGALDQGKWI 182
           RN VSWS+MIT Y ++G F+EALE+FN M ++   PN AGIV A++AC  LGALDQG+WI
Sbjct: 206 RNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWI 265

Query: 183 HVYVERNGMVLDRILGTALIDMYAKCGCIENALKVFDEMLAKGYVPNSITYNLVIRGLCH 362
           H Y++RN M LDR++G ALIDMYAKCGCIE A  +F E+  +    +   Y  +I GL +
Sbjct: 266 HCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNR----DVHVYTCLISGLAN 321

Query: 363 AGETA 377
            G++A
Sbjct: 322 HGQSA 326