BLASTX nr result

ID: Dioscorea21_contig00032227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032227
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274806.1| PREDICTED: rop guanine nucleotide exchange f...    82   4e-17
emb|CAN75305.1| hypothetical protein VITISV_040402 [Vitis vinifera]    69   2e-13
ref|XP_002511862.1| Rop guanine nucleotide exchange factor, puta...    67   3e-13
emb|CBI40378.3| unnamed protein product [Vitis vinifera]               68   6e-13
dbj|BAJ93652.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   2e-12

>ref|XP_002274806.1| PREDICTED: rop guanine nucleotide exchange factor 2-like [Vitis
           vinifera]
          Length = 504

 Score = 82.0 bits (201), Expect(2) = 4e-17
 Identities = 59/127 (46%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
 Frame = -3

Query: 411 SSEDHAECSTPSADSLEYSRTIXXXXXXXXXXXSDDAFSL-----GWPISAKTTAT-TVR 250
           S+   A  STPSADS+ Y RT             + ++S       WP++   T T T  
Sbjct: 35  SARSTAHSSTPSADSISYMRTYSQSSNFSDRTEDNSSYSYEASASAWPVARIETQTETPH 94

Query: 249 SPAVLTKLGMKQHC-DLVPSGKPNNXXXXXXXXXXXXXERFSKLLLGEDMSGSGKGVCTA 73
             AVLT L MKQH  DL     P               ERFSKLLLGEDMSGSGKGVCTA
Sbjct: 95  KQAVLTGLEMKQHKHDL----DPKYDDDALDSELELMKERFSKLLLGEDMSGSGKGVCTA 150

Query: 72  VTISNAI 52
           VTISNAI
Sbjct: 151 VTISNAI 157



 Score = 30.8 bits (68), Expect(2) = 4e-17
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  TNLYATVFGQCWRLEPL 2
           TNLYAT+FGQ  +LEPL
Sbjct: 158 TNLYATIFGQNQKLEPL 174


>emb|CAN75305.1| hypothetical protein VITISV_040402 [Vitis vinifera]
          Length = 445

 Score = 69.3 bits (168), Expect(2) = 2e-13
 Identities = 47/87 (54%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = -3

Query: 306 DAFSLGWPISAKTTAT-TVRSPAVLTKLGMKQH-CDLVPSGKPNNXXXXXXXXXXXXXER 133
           +A +  WP++   T T T +  AVLT L MKQH  DL     P               ER
Sbjct: 16  EASASAWPVTRIETQTETPQKQAVLTGLEMKQHEHDL----DPKYDDDALDSELELMKER 71

Query: 132 FSKLLLGEDMSGSGKGVCTAVTISNAI 52
           FSKLLLGEDMSGSGKGVCTAVTISNAI
Sbjct: 72  FSKLLLGEDMSGSGKGVCTAVTISNAI 98



 Score = 30.8 bits (68), Expect(2) = 2e-13
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  TNLYATVFGQCWRLEPL 2
           TNLYAT+FGQ  +LEPL
Sbjct: 99  TNLYATIFGQNQKLEPL 115


>ref|XP_002511862.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223549042|gb|EEF50531.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 471

 Score = 66.6 bits (161), Expect(2) = 3e-13
 Identities = 53/133 (39%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
 Frame = -3

Query: 426 FRMEDSSEDHAEC---STPSADSLEYSRTIXXXXXXXXXXXSDDAFSLG-----WPISAK 271
           ++   SS D  E    ST S DS  + RT             D+++S       WP +  
Sbjct: 15  YQPSPSSFDQTETPGFSTTSGDSFLFRRTYSETSTVSDPID-DNSYSCEPSPSHWPANKS 73

Query: 270 TTATTVRSPAVLTKLGMKQHCDLVPSGKPNNXXXXXXXXXXXXXERFSKLLLGEDMSGSG 91
            T    R+  VL +LGMKQ   +V   +  +              RFSKLLLGEDMSGSG
Sbjct: 74  AT----RNQPVLGRLGMKQRMHIVDDQETVDSELEMMKE------RFSKLLLGEDMSGSG 123

Query: 90  KGVCTAVTISNAI 52
           KGVCTAVTISNAI
Sbjct: 124 KGVCTAVTISNAI 136



 Score = 33.1 bits (74), Expect(2) = 3e-13
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  TNLYATVFGQCWRLEPL 2
           TNLYATVFGQ  RLEPL
Sbjct: 137 TNLYATVFGQTLRLEPL 153


>emb|CBI40378.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 67.8 bits (164), Expect(2) = 6e-13
 Identities = 50/126 (39%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = -3

Query: 411 SSEDHAECSTPSADSLEYSRTIXXXXXXXXXXXSDDAFSL-----GWPISAKTTAT-TVR 250
           S+   A  STPSADS+ Y RT             + ++S       WP++   T T T  
Sbjct: 35  SARSTAHSSTPSADSISYMRTYSQSSNFSDRTEDNSSYSYEASASAWPVARIETQTETPH 94

Query: 249 SPAVLTKLGMKQHCDLVPSGKPNNXXXXXXXXXXXXXERFSKLLLGEDMSGSGKGVCTAV 70
             AV   + +             N             ERFSKLLLGEDMSGSGKGVCTAV
Sbjct: 95  KQAVWILICL------------TNLYLIFWAELELMKERFSKLLLGEDMSGSGKGVCTAV 142

Query: 69  TISNAI 52
           TISNAI
Sbjct: 143 TISNAI 148



 Score = 30.8 bits (68), Expect(2) = 6e-13
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  TNLYATVFGQCWRLEPL 2
           TNLYAT+FGQ  +LEPL
Sbjct: 149 TNLYATIFGQNQKLEPL 165


>dbj|BAJ93652.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 478

 Score = 62.8 bits (151), Expect(2) = 2e-12
 Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
 Frame = -3

Query: 417 EDSSEDHAECSTPSA------DSLEYSRTIXXXXXXXXXXXSDDAFSLGWPISAKTTATT 256
           ++SSE  A+C + S+      D++++SRT             D +   G    +K     
Sbjct: 14  DESSEAEAQCCSSSSTAPSLVDAVDFSRTASDVSTFSERSV-DHSGPFGTAAVSKLIGGR 72

Query: 255 VRSPAVLTKLGMKQHCDLVPSGKPNNXXXXXXXXXXXXXERFSKLLLGEDMSGSGKGVCT 76
               A L++L MK   D++      +              RFSKLLLGEDMSG GKGVCT
Sbjct: 73  GSPAAALSRLSMKPRADVIDRRSTEDELDLVKE-------RFSKLLLGEDMSGGGKGVCT 125

Query: 75  AVTISNAI 52
           AV ISNAI
Sbjct: 126 AVAISNAI 133



 Score = 33.9 bits (76), Expect(2) = 2e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 52  TNLYATVFGQCWRLEPL 2
           TNLYATVFG C +LEPL
Sbjct: 134 TNLYATVFGSCHKLEPL 150


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