BLASTX nr result

ID: Dioscorea21_contig00032226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032226
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                        68   7e-10
emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera]    65   4e-09
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    65   4e-09
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    65   7e-09
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]    64   1e-08

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/99 (33%), Positives = 54/99 (54%)
 Frame = +1

Query: 1   DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180
           DE++++ IF+GYC  +K YR+Y P +GK++ SR+V F E+  W W   +      IF  +
Sbjct: 526 DEKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFDEEAVWTWREGDNGELVEIFVND 585

Query: 181 MQGKSVSVGISGSNQPVVTVPNIVSSSENVASVPSEGTS 297
            Q ++ S   S +N P  + P+    +    S   EG+S
Sbjct: 586 EQEENPSPANSATNTPASSAPSSPGPNNGNGSSDGEGSS 624


>emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera]
          Length = 738

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/60 (51%), Positives = 43/60 (71%)
 Frame = +1

Query: 1   DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180
           D++A+ GIF+GY   +KAYRIY+P   K+IVSRDV F E + W+WE++    KK+ FQ E
Sbjct: 156 DKKAEAGIFIGYSSISKAYRIYLPENNKVIVSRDVKFFELESWSWEND----KKLEFQEE 211


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
 Frame = +1

Query: 1   DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESN------EAEAKK 162
           DE++ + IF+GYC  +K Y++Y P +GK+IVSR+V F E   W W  +      E  ++ 
Sbjct: 619 DEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDGALVEISSES 678

Query: 163 IIFQTEMQGKSVSVGISGSNQPVVTVPNIVSSSENVAS 276
            + Q+E Q  SV +  S +     + PN+ SSS + +S
Sbjct: 679 EVAQSEDQQPSVQIPASPTPSHSPSSPNLSSSSSSQSS 716


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180
           DE++ + IFVGY L +KAYR+Y P +GK+I+SR+V F ED  WN+ S    +   +  T+
Sbjct: 688 DEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVSWNFNSGNMMSNIQLLPTD 747

Query: 181 MQGKSVSVGISGSNQPV-VTVPNIVSSSENVASVPSEGTSE 300
            +  +V  G S ++ PV  +V + ++ S  VA  P E + E
Sbjct: 748 -EESAVDFGNSPNSSPVSSSVSSPIAPSTTVA--PDESSVE 785


>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
          Length = 1102

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = +1

Query: 1   DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180
           D++A+  IF+GY   +KAYRIY+P   K+IVSRDV F E + W+WE++    KK+ FQ E
Sbjct: 520 DKKAEAXIFIGYSSISKAYRIYLPENNKVIVSRDVKFFESESWSWEND----KKLEFQEE 575


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