BLASTX nr result
ID: Dioscorea21_contig00032226
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00032226 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABW74566.1| integrase [Boechera divaricarpa] 68 7e-10 emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera] 65 4e-09 emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 65 4e-09 gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 65 7e-09 emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] 64 1e-08 >gb|ABW74566.1| integrase [Boechera divaricarpa] Length = 1165 Score = 68.2 bits (165), Expect = 7e-10 Identities = 33/99 (33%), Positives = 54/99 (54%) Frame = +1 Query: 1 DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180 DE++++ IF+GYC +K YR+Y P +GK++ SR+V F E+ W W + IF + Sbjct: 526 DEKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFDEEAVWTWREGDNGELVEIFVND 585 Query: 181 MQGKSVSVGISGSNQPVVTVPNIVSSSENVASVPSEGTS 297 Q ++ S S +N P + P+ + S EG+S Sbjct: 586 EQEENPSPANSATNTPASSAPSSPGPNNGNGSSDGEGSS 624 >emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera] Length = 738 Score = 65.5 bits (158), Expect = 4e-09 Identities = 31/60 (51%), Positives = 43/60 (71%) Frame = +1 Query: 1 DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180 D++A+ GIF+GY +KAYRIY+P K+IVSRDV F E + W+WE++ KK+ FQ E Sbjct: 156 DKKAEAGIFIGYSSISKAYRIYLPENNKVIVSRDVKFFELESWSWEND----KKLEFQEE 211 >emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] Length = 1183 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 6/98 (6%) Frame = +1 Query: 1 DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESN------EAEAKK 162 DE++ + IF+GYC +K Y++Y P +GK+IVSR+V F E W W + E ++ Sbjct: 619 DEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDGALVEISSES 678 Query: 163 IIFQTEMQGKSVSVGISGSNQPVVTVPNIVSSSENVAS 276 + Q+E Q SV + S + + PN+ SSS + +S Sbjct: 679 EVAQSEDQQPSVQIPASPTPSHSPSSPNLSSSSSSQSS 716 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 64.7 bits (156), Expect = 7e-09 Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Frame = +1 Query: 1 DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180 DE++ + IFVGY L +KAYR+Y P +GK+I+SR+V F ED WN+ S + + T+ Sbjct: 688 DEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVSWNFNSGNMMSNIQLLPTD 747 Query: 181 MQGKSVSVGISGSNQPV-VTVPNIVSSSENVASVPSEGTSE 300 + +V G S ++ PV +V + ++ S VA P E + E Sbjct: 748 -EESAVDFGNSPNSSPVSSSVSSPIAPSTTVA--PDESSVE 785 >emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] Length = 1102 Score = 64.3 bits (155), Expect = 1e-08 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +1 Query: 1 DERAQRGIFVGYCLNAKAYRIYIPSTGKMIVSRDVYFAEDDCWNWESNEAEAKKIIFQTE 180 D++A+ IF+GY +KAYRIY+P K+IVSRDV F E + W+WE++ KK+ FQ E Sbjct: 520 DKKAEAXIFIGYSSISKAYRIYLPENNKVIVSRDVKFFESESWSWEND----KKLEFQEE 575