BLASTX nr result

ID: Dioscorea21_contig00032217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032217
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communi...    81   8e-14
ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
gb|EEC74794.1| hypothetical protein OsI_10585 [Oryza sativa Indi...    69   5e-10
ref|NP_001049431.1| Os03g0225200 [Oryza sativa Japonica Group] g...    69   5e-10
gb|AAN52744.1| Hypothetical protein [Oryza sativa Japonica Group]      68   7e-10

>ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550324|gb|EEF51811.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 471

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/86 (47%), Positives = 56/86 (65%)
 Frame = +2

Query: 2   EQTLLTGCEDGKIYMTAIIVGLEEDETVIPGDEFGIWSKHKGTITALKFSLEGKLLFSAS 181
           +Q L  GC DG+I+++ + VGL +D  VI  D   +   HKG+ITAL FS  G  L SAS
Sbjct: 234 DQFLFAGCIDGRIFVSMLNVGLVDDPLVIAEDPLVVLEGHKGSITALTFSTLG--LISAS 291

Query: 182 KDHLICIWDASNWQLIRSFNYGKGSI 259
           +D  IC+WDA +W  I+ FNY KG++
Sbjct: 292 EDCTICLWDAVSWVAIQRFNYHKGAV 317


>ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|222869236|gb|EEF06367.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/86 (41%), Positives = 52/86 (60%)
 Frame = +2

Query: 2   EQTLLTGCEDGKIYMTAIIVGLEEDETVIPGDEFGIWSKHKGTITALKFSLEGKLLFSAS 181
           EQ L  G  DG+I+++ + +GL ED   + GDE  +   H G+I AL FS  G  L SAS
Sbjct: 237 EQLLFAGSMDGRIFVSVLDIGLLEDPFAVAGDEPVVLKGHNGSIMALTFSSVG--LISAS 294

Query: 182 KDHLICIWDASNWQLIRSFNYGKGSI 259
           +D  +C+WD     +IR FN+ KG++
Sbjct: 295 EDCTVCLWDVVGQVIIRRFNHKKGAV 320


>gb|EEC74794.1| hypothetical protein OsI_10585 [Oryza sativa Indica Group]
          Length = 470

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/66 (53%), Positives = 43/66 (65%)
 Frame = +1

Query: 241 LWKRFYLKASGADAEVEALARYLAVLSLLDHERLSFWPXXXXXXXXXXXXXXXDHDSSCH 420
           LW  FYLKA+ AD  VE LA+YLA+LSLLDH+ LSFWP               +++SSCH
Sbjct: 384 LW--FYLKAANADDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCH 441

Query: 421 LVMEVN 438
           LVME +
Sbjct: 442 LVMETH 447


>ref|NP_001049431.1| Os03g0225200 [Oryza sativa Japonica Group]
           gi|122247344|sp|Q10PQ9.1|CCSDS_ORYSJ RecName:
           Full=Cyclin-SDS-like; AltName: Full=Protein SOLO
           DANCERS-like gi|108706939|gb|ABF94734.1| Cyclin,
           N-terminal domain containing protein, expressed [Oryza
           sativa Japonica Group] gi|113547902|dbj|BAF11345.1|
           Os03g0225200 [Oryza sativa Japonica Group]
           gi|215704323|dbj|BAG93757.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222624493|gb|EEE58625.1| hypothetical protein
           OsJ_09984 [Oryza sativa Japonica Group]
          Length = 469

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/66 (53%), Positives = 43/66 (65%)
 Frame = +1

Query: 241 LWKRFYLKASGADAEVEALARYLAVLSLLDHERLSFWPXXXXXXXXXXXXXXXDHDSSCH 420
           LW  FYLKA+ AD  VE LA+YLA+LSLLDH+ LSFWP               +++SSCH
Sbjct: 383 LW--FYLKAANADDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCH 440

Query: 421 LVMEVN 438
           LVME +
Sbjct: 441 LVMETH 446


>gb|AAN52744.1| Hypothetical protein [Oryza sativa Japonica Group]
          Length = 258

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/64 (54%), Positives = 42/64 (65%)
 Frame = +1

Query: 241 LWKRFYLKASGADAEVEALARYLAVLSLLDHERLSFWPXXXXXXXXXXXXXXXDHDSSCH 420
           LW  FYLKA+ AD  VE LA+YLA+LSLLDH+ LSFWP               +++SSCH
Sbjct: 22  LW--FYLKAANADDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCH 79

Query: 421 LVME 432
           LVME
Sbjct: 80  LVME 83


Top