BLASTX nr result

ID: Dioscorea21_contig00032174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032174
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85667.1| predicted protein [Hordeum vulgare subsp. vulgar...   110   9e-23
ref|XP_003568489.1| PREDICTED: protein ABCI12, chloroplastic-lik...   110   1e-22
ref|XP_004167000.1| PREDICTED: protein ABCI12, chloroplastic-lik...   109   3e-22
ref|XP_004153425.1| PREDICTED: protein ABCI12, chloroplastic-lik...   109   3e-22
ref|XP_004145039.1| PREDICTED: protein ABCI12, chloroplastic-lik...   109   3e-22

>dbj|BAJ85667.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532658|dbj|BAJ89174.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 394

 Score =  110 bits (276), Expect = 9e-23
 Identities = 48/71 (67%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
 Frame = -2

Query: 206 WESWIRH---GAISPERILRVIAGATSSPICQFIESPRTFLHSVDPRIKLIWLLALVILP 36
           W +WI     G + PE++LR+I+GA ++PICQF++SPRTFLHSVDPR+KL+WLLALV+LP
Sbjct: 76  WAAWIPRAAVGGVGPEKVLRLISGAAATPICQFVDSPRTFLHSVDPRVKLVWLLALVVLP 135

Query: 35  ARSNIYIRFGL 3
           ARSNIY+RFGL
Sbjct: 136 ARSNIYMRFGL 146


>ref|XP_003568489.1| PREDICTED: protein ABCI12, chloroplastic-like [Brachypodium
           distachyon]
          Length = 395

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/71 (67%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
 Frame = -2

Query: 206 WESWIRH---GAISPERILRVIAGATSSPICQFIESPRTFLHSVDPRIKLIWLLALVILP 36
           W +WI     G + PE++LR+I+GA ++PICQF++SPRTFLHSVDPR+KL+WLLALV+LP
Sbjct: 77  WAAWIPRAAVGGVGPEQVLRLISGAAATPICQFVDSPRTFLHSVDPRVKLVWLLALVVLP 136

Query: 35  ARSNIYIRFGL 3
           ARSNIY+RFGL
Sbjct: 137 ARSNIYMRFGL 147


>ref|XP_004167000.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 345

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/76 (69%), Positives = 64/76 (84%)
 Frame = -2

Query: 230 NEGTPSKGWESWIRHGAISPERILRVIAGATSSPICQFIESPRTFLHSVDPRIKLIWLLA 51
           ++ T ++ W  WI +GA++ ++ILR IAGAT+SPI QFI SP TFLHSVDPRIKLIWLLA
Sbjct: 66  SDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIWLLA 125

Query: 50  LVILPARSNIYIRFGL 3
           LV+LPARSNI IRFGL
Sbjct: 126 LVVLPARSNITIRFGL 141


>ref|XP_004153425.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 390

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/76 (69%), Positives = 64/76 (84%)
 Frame = -2

Query: 230 NEGTPSKGWESWIRHGAISPERILRVIAGATSSPICQFIESPRTFLHSVDPRIKLIWLLA 51
           ++ T ++ W  WI +GA++ ++ILR IAGAT+SPI QFI SP TFLHSVDPRIKLIWLLA
Sbjct: 66  SDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIWLLA 125

Query: 50  LVILPARSNIYIRFGL 3
           LV+LPARSNI IRFGL
Sbjct: 126 LVVLPARSNITIRFGL 141


>ref|XP_004145039.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/76 (69%), Positives = 64/76 (84%)
 Frame = -2

Query: 230 NEGTPSKGWESWIRHGAISPERILRVIAGATSSPICQFIESPRTFLHSVDPRIKLIWLLA 51
           ++ T ++ W  WI +GA++ ++ILR IAGAT+SPI QFI SP TFLHSVDPRIKLIWLLA
Sbjct: 222 SDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIWLLA 281

Query: 50  LVILPARSNIYIRFGL 3
           LV+LPARSNI IRFGL
Sbjct: 282 LVVLPARSNITIRFGL 297


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