BLASTX nr result
ID: Dioscorea21_contig00032134
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00032134 (731 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t... 121 1e-25 ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 106 6e-21 emb|CBI25341.3| unnamed protein product [Vitis vinifera] 106 6e-21 ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat... 106 6e-21 emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera] 103 4e-20 >ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula] gi|355516770|gb|AES98393.1| ATP-dependent helicase, putative [Medicago truncatula] Length = 1764 Score = 121 bits (304), Expect = 1e-25 Identities = 74/182 (40%), Positives = 101/182 (55%), Gaps = 3/182 (1%) Frame = -3 Query: 546 MGRRKARPIRSEGILSDIGVADSTNSDEKLNNDGQLEAVNGNANEQVLESQKSFYINIDR 367 MGRRK++P RS GI+ + + T + V G N + K +++ +DR Sbjct: 1 MGRRKSKPHRSGGIIVETNASAETELE-----------VGGKENNDFGDIYKPYFVEVDR 49 Query: 366 NHCDFDEHFDIAEIILNDVRFPVGDVVDRSSGDKV-DPEFSLRFKL--IGVEESSFRLGH 196 + DEH DI+EI+L D+ G S D DP+FSLRF+L IG + +LGH Sbjct: 50 SGWLSDEHLDISEIVLRDLNIGEGFYGFELSEDFYQDPQFSLRFRLCNIGSDLGRIKLGH 109 Query: 195 WPVLSADSIFLECIFLDNSTSEGGSKSKVLLSGVFDGPDEGVSGLVHLVSQKLLTIRLVS 16 WPVL I LE F+ ++ + VLLSG+FDGPDE VSGLVHL S K +T+R V Sbjct: 110 WPVLPYTDIHLE--FVKRASVDDTETCTVLLSGIFDGPDESVSGLVHLASMKFVTLRAVL 167 Query: 15 GV 10 G+ Sbjct: 168 GI 169 >ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera] Length = 1704 Score = 106 bits (264), Expect = 6e-21 Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%) Frame = -3 Query: 546 MGRRKA-RPIRSEGILSDIGVADSTNSDEKLNNDGQLEAVNGNANEQVLESQKSFYINID 370 MGRRK +P RS G++ + ++ + LN+ Q E G ++V +++ ++ +D Sbjct: 1 MGRRKQPKPHRSVGVVERLETQETAEGE--LNS--QQEHAQG---DEVGDAETPLFVEVD 53 Query: 369 RNHCDFDEHFDIAEIILNDVR-------FPVGDVVDRSSGDKVDPEFSLRFKLIGVEE-- 217 R EH DI+EI+LND+ + +G+ G + + LRF+L + Sbjct: 54 RTGWGSGEHLDISEIVLNDLNLREEFHGYSLGE------GFYENSKCCLRFRLCNANQFV 107 Query: 216 SSFRLGHWPVLSADSIFLECIFLDNSTSEGGSKS-KVLLSGVFDGPDEGVSGLVHLVSQK 40 RLGHWPV++A SI LE F++ SE G ++ V+LSG+FDGPDEGVSGLVHL K Sbjct: 108 GRIRLGHWPVVAASSISLE--FVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLK 165 Query: 39 LLTIRLVSGV 10 LLT+R V GV Sbjct: 166 LLTLRPVLGV 175 >emb|CBI25341.3| unnamed protein product [Vitis vinifera] Length = 1717 Score = 106 bits (264), Expect = 6e-21 Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%) Frame = -3 Query: 546 MGRRKA-RPIRSEGILSDIGVADSTNSDEKLNNDGQLEAVNGNANEQVLESQKSFYINID 370 MGRRK +P RS G++ + ++ + LN+ Q E G ++V +++ ++ +D Sbjct: 1 MGRRKQPKPHRSVGVVERLETQETAEGE--LNS--QQEHAQG---DEVGDAETPLFVEVD 53 Query: 369 RNHCDFDEHFDIAEIILNDVR-------FPVGDVVDRSSGDKVDPEFSLRFKLIGVEE-- 217 R EH DI+EI+LND+ + +G+ G + + LRF+L + Sbjct: 54 RTGWGSGEHLDISEIVLNDLNLREEFHGYSLGE------GFYENSKCCLRFRLCNANQFV 107 Query: 216 SSFRLGHWPVLSADSIFLECIFLDNSTSEGGSKS-KVLLSGVFDGPDEGVSGLVHLVSQK 40 RLGHWPV++A SI LE F++ SE G ++ V+LSG+FDGPDEGVSGLVHL K Sbjct: 108 GRIRLGHWPVVAASSISLE--FVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLK 165 Query: 39 LLTIRLVSGV 10 LLT+R V GV Sbjct: 166 LLTLRPVLGV 175 >ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] Length = 1588 Score = 106 bits (264), Expect = 6e-21 Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 7/185 (3%) Frame = -3 Query: 546 MGRRK-ARPIRSEGILSDIGVADSTNSDEKLNNDGQLEAVNGNANEQVLESQKSFYINID 370 MGRRK ARP RS G++ NS + D Q +A ++ E+ + + +Y+ +D Sbjct: 1 MGRRKQARPNRSGGLVI-------ANSASEAELDKQ-KAPKTDSAEKAIPVSRPYYVEVD 52 Query: 369 RNHCDFDEHFDIAEIILNDVRFPVGDVVDR---SSGDKVDPEFSLRFKLIGVEE---SSF 208 +++ ++HFDI+E+ILND+ +G+ S + ++SLR ++ V+ Sbjct: 53 KSNWVSNDHFDISEVILNDLN--LGEAYSSCRIKSNFSQESKYSLRVRVCNVDGFVLDRI 110 Query: 207 RLGHWPVLSADSIFLECIFLDNSTSEGGSKSKVLLSGVFDGPDEGVSGLVHLVSQKLLTI 28 +LG+WPVLS+ I LECI + S E V+ SG FDGPDEG++ LVHL+S + LT+ Sbjct: 111 KLGYWPVLSSSDISLECI--EESMVEDKEMQSVIFSGSFDGPDEGITSLVHLISMEFLTL 168 Query: 27 RLVSG 13 R V G Sbjct: 169 RPVLG 173 >emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera] Length = 1111 Score = 103 bits (257), Expect = 4e-20 Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 2/181 (1%) Frame = -3 Query: 546 MGRRKA-RPIRSEGILSDIGVADSTNSDEKLNNDGQLEAVNGNANEQVLESQKSFYINID 370 MGRRK +P RS G++ + ++ + LN+ Q E G ++V +++ ++ +D Sbjct: 1 MGRRKQPKPHRSVGVVERLETQETAEGE--LNS--QQEHAQG---DEVGDAETPLFVEVD 53 Query: 369 RNHCDFDEHFDIAEIILNDVRFPVGDVVDRSSGDKVDPEFSLRFKLIGVEESSFRLGHWP 190 R EH DI+EI+LND+ ++ + G + ++R L G RLGHWP Sbjct: 54 RTGWGSGEHLDISEIVLNDL-----NLREEFHGYSLGFGSAMRTSLWG----RIRLGHWP 104 Query: 189 VLSADSIFLECIFLDNSTSEGGSKS-KVLLSGVFDGPDEGVSGLVHLVSQKLLTIRLVSG 13 V++A SI LE F++ SE G ++ V+LSG+FDGPDEGVSGLVHL KLLT+R V G Sbjct: 105 VVAASSISLE--FVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLG 162 Query: 12 V 10 V Sbjct: 163 V 163