BLASTX nr result

ID: Dioscorea21_contig00032099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032099
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588560.1| DNA polymerase I family protein expressed [M...   219   1e-55
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   215   3e-54
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              215   3e-54
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   215   3e-54
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   213   1e-53

>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
            gi|355477608|gb|AES58811.1| DNA polymerase I family
            protein expressed [Medicago truncatula]
          Length = 2269

 Score =  219 bits (559), Expect = 1e-55
 Identities = 108/156 (69%), Positives = 128/156 (82%)
 Frame = -3

Query: 470  QIQVLKIPSISIQRFGRLYHDHKDIDGIEVVGGSYLLLPSISIRDGIDMCLISWILWPDE 291
            QIQVLK PS+S+QRFG L    K++  +EVV  SY+LLP I ++D IDMC+++WILWPDE
Sbjct: 1640 QIQVLKKPSVSVQRFGSLDTIDKNMH-LEVVDNSYILLPPIHVKDAIDMCIVAWILWPDE 1698

Query: 290  ESKSNQSLEKLVKKRMSSEAAAAANRDSRWKNQMHKAAHNGCCRRVAQTRALDSVLWKLL 111
            ES S+ +L+K VKKR+S E AAAAN+  RW+NQM KAAHNGCCRRVAQTRAL SVLWKLL
Sbjct: 1699 ESSSSPNLDKEVKKRLSPEDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLL 1758

Query: 110  ASENLVEALTNIEIPLVKVLADMELWGIGIDMEACL 3
             SE LVEAL  IEIPLV VLADMELWGIG+D+E C+
Sbjct: 1759 VSEKLVEALMEIEIPLVNVLADMELWGIGVDLEGCI 1794


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/156 (66%), Positives = 126/156 (80%)
 Frame = -3

Query: 470  QIQVLKIPSISIQRFGRLYHDHKDIDGIEVVGGSYLLLPSISIRDGIDMCLISWILWPDE 291
            QIQVLK P++SIQ+FG L    + + G+E++  SYL+L  + I DG+DMC+++WILWPDE
Sbjct: 1606 QIQVLKNPAVSIQKFGSLNLAMRTM-GLELIDNSYLMLSPVYIVDGLDMCIVTWILWPDE 1664

Query: 290  ESKSNQSLEKLVKKRMSSEAAAAANRDSRWKNQMHKAAHNGCCRRVAQTRALDSVLWKLL 111
            E  SN +LEK V+KR+SSEAAAAANR  RWKNQ  +AAHNGCCRRVAQTRAL SVLWKLL
Sbjct: 1665 ERSSNPNLEKEVRKRLSSEAAAAANRSGRWKNQTRRAAHNGCCRRVAQTRALCSVLWKLL 1724

Query: 110  ASENLVEALTNIEIPLVKVLADMELWGIGIDMEACL 3
             SE LVE L  IEIPLV +LADME+WGIG+DME C+
Sbjct: 1725 VSEELVEVLLRIEIPLVTILADMEVWGIGVDMEGCI 1760


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/156 (66%), Positives = 126/156 (80%)
 Frame = -3

Query: 470  QIQVLKIPSISIQRFGRLYHDHKDIDGIEVVGGSYLLLPSISIRDGIDMCLISWILWPDE 291
            QIQVLK P++SIQ+FG L    + + G+E++  SYL+L  + I DG+DMC+++WILWPDE
Sbjct: 1502 QIQVLKNPAVSIQKFGSLNLAMRTM-GLELIDNSYLMLSPVYIVDGLDMCIVTWILWPDE 1560

Query: 290  ESKSNQSLEKLVKKRMSSEAAAAANRDSRWKNQMHKAAHNGCCRRVAQTRALDSVLWKLL 111
            E  SN +LEK V+KR+SSEAAAAANR  RWKNQ  +AAHNGCCRRVAQTRAL SVLWKLL
Sbjct: 1561 ERSSNPNLEKEVRKRLSSEAAAAANRSGRWKNQTRRAAHNGCCRRVAQTRALCSVLWKLL 1620

Query: 110  ASENLVEALTNIEIPLVKVLADMELWGIGIDMEACL 3
             SE LVE L  IEIPLV +LADME+WGIG+DME C+
Sbjct: 1621 VSEELVEVLLRIEIPLVTILADMEVWGIGVDMEGCI 1656


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  215 bits (548), Expect = 3e-54
 Identities = 105/156 (67%), Positives = 126/156 (80%)
 Frame = -3

Query: 470  QIQVLKIPSISIQRFGRLYHDHKDIDGIEVVGGSYLLLPSISIRDGIDMCLISWILWPDE 291
            QIQVLK   +SI RFG      KD+D +E++  S+L LP I++ +GIDMC+++WILWPDE
Sbjct: 1573 QIQVLKNAVVSIHRFGSTNLSGKDLD-LELIDSSHLPLPQINVTEGIDMCIVAWILWPDE 1631

Query: 290  ESKSNQSLEKLVKKRMSSEAAAAANRDSRWKNQMHKAAHNGCCRRVAQTRALDSVLWKLL 111
            E  SN +LEK VK+R+ ++A AAANR+ RWKNQM +AAHNGCCRRVAQTRAL SVLWKLL
Sbjct: 1632 ERSSNPNLEKEVKRRLPTQAVAAANRNGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL 1691

Query: 110  ASENLVEALTNIEIPLVKVLADMELWGIGIDMEACL 3
             SE LVEAL  IE+PLV VLADMELWGIG+DMEACL
Sbjct: 1692 ISEGLVEALKKIEMPLVNVLADMELWGIGVDMEACL 1727


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  213 bits (542), Expect = 1e-53
 Identities = 103/156 (66%), Positives = 126/156 (80%)
 Frame = -3

Query: 470  QIQVLKIPSISIQRFGRLYHDHKDIDGIEVVGGSYLLLPSISIRDGIDMCLISWILWPDE 291
            Q+QVLK P+ S+QRFG L    K +D +EVV  SY+LLP I ++D IDMC+++WILWPDE
Sbjct: 1562 QMQVLKRPAFSVQRFGCLDTLGKSMD-LEVVDNSYVLLPPIHVKDAIDMCIVAWILWPDE 1620

Query: 290  ESKSNQSLEKLVKKRMSSEAAAAANRDSRWKNQMHKAAHNGCCRRVAQTRALDSVLWKLL 111
            ES S+ +L+K VKKR+SSE AA AN+  RW+NQM +AAHNGCCRRVAQ RAL SVLWKLL
Sbjct: 1621 ESSSSPNLDKEVKKRLSSEDAAVANQSGRWRNQMRRAAHNGCCRRVAQIRALSSVLWKLL 1680

Query: 110  ASENLVEALTNIEIPLVKVLADMELWGIGIDMEACL 3
             SE LVE L +IEIPLV V+ADMELWGIG+D+E C+
Sbjct: 1681 VSEKLVEVLMDIEIPLVNVVADMELWGIGVDLERCI 1716


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