BLASTX nr result

ID: Dioscorea21_contig00032086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032086
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]   418   e-114
ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containi...   402   e-110
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,...   399   e-109
ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containi...   399   e-108

>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  424 bits (1091), Expect = e-116
 Identities = 205/300 (68%), Positives = 243/300 (81%)
 Frame = -1

Query: 907 RGFQAATDESGNPLVRETCRLIGLRQSWNPKFEGQLRHLLRTMQPQQVCAVLRCQADLRV 728
           R F+   DES +PLVRE CRLI LR +WNPK EG+LRHLLR+++P+QVCAVL+ Q D RV
Sbjct: 57  RRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERV 116

Query: 727 AANFFYWADRQWRYRHAPEVYYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEVFGHLM 548
           A  FFYWADRQWRYRH P VYY MLEILSKTKLCQ A              RPE FG++M
Sbjct: 117 ALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVM 176

Query: 547 VMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIE 368
           V YSRAGKLR+AMRVL +MQK G  P+LSICNTAIHVLVM +RL+KA+RFL+RMQ V IE
Sbjct: 177 VSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIE 236

Query: 367 PDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGL 188
           P+V+T+NCLIKG+C+  R+ DA+E+I EM  +GC PDKISYYTVM  LCKEKRI+EVR L
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLL 296

Query: 187 LEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
           +EKM KD+NLLPDQVTYNT +H+LSKHGH DEALE L+E+E + FR+DKVGYSA+VH+FC
Sbjct: 297 MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 356



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 48/173 (27%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = -1

Query: 526 KLRSAMRVLNLMQKDG-CSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTF 350
           +++    ++  M KD    P+    NT +H+L      ++AL FL   +      D V +
Sbjct: 289 RIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY 348

Query: 349 NCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRK 170
           + ++  FC   R+  A E++ EM ++GC PD ++Y +V+  LC+E+++ + + +L +M K
Sbjct: 349 SAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK 408

Query: 169 DANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAF 11
                P+ V+Y  +++ L K+G++ EA E++  SE   +  + + YS ++H F
Sbjct: 409 H-GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGF 460



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 55/182 (30%), Positives = 92/182 (50%)
 Frame = -1

Query: 553 LMVMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVG 374
           LM  + R GK   A  ++  M K G  P     N  I  L   +++++A RF+++    G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515

Query: 373 IEPDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVR 194
              +VV F  +I GFC    +  AL ++ +M      PD ++Y T++  L K+ RI+E  
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575

Query: 193 GLLEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHA 14
            L  KM +   L+P  VTY TVIH   + G  ++ L+LL++  ++  +  +  Y+ V+  
Sbjct: 576 KLAMKMLR-VGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEK 632

Query: 13  FC 8
            C
Sbjct: 633 LC 634



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 45/178 (25%), Positives = 85/178 (47%)
 Frame = -1

Query: 541 YSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPD 362
           + R G++  A  ++N M   GC P++    + I+ L    ++++A + L +M + G +P+
Sbjct: 355 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414

Query: 361 VVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLE 182
            V++  L+ G C      +A EM+         P+ I+Y  +M    +E +  E   L+ 
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 474

Query: 181 KMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
           +M K     P  V  N +I  L +    DEA   +++    G  ++ V ++ V+H FC
Sbjct: 475 EMIK-KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFC 531



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 49/161 (30%), Positives = 76/161 (47%)
 Frame = -1

Query: 526 KLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFN 347
           K+  A R +     +GC+ N+    T IH     D LE AL  LD M      PDVVT+ 
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559

Query: 346 CLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKD 167
            +I       R+ +A ++  +M   G  P  ++Y TV+   C+  R++++  LLEKM   
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619

Query: 166 ANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRID 44
                 +  YN VI  L   G+ ++A +LL +      +ID
Sbjct: 620 QEC---RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 657


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  418 bits (1074), Expect = e-114
 Identities = 202/300 (67%), Positives = 240/300 (80%)
 Frame = -1

Query: 907 RGFQAATDESGNPLVRETCRLIGLRQSWNPKFEGQLRHLLRTMQPQQVCAVLRCQADLRV 728
           R F+   DES +PLVRE CRLI LR +WNPK EG+LRHLLR+++P+QVCAVL+ Q D RV
Sbjct: 57  RRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERV 116

Query: 727 AANFFYWADRQWRYRHAPEVYYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEVFGHLM 548
           A  FFYWADRQWRYRH P VYY MLEILSKTKLCQ A              RPE FG++M
Sbjct: 117 ALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVM 176

Query: 547 VMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIE 368
           V YSRAGKLR+AMR L +MQK G  P+LSICNTAIHVLVM +RL+KA+RFL+RMQ V I 
Sbjct: 177 VSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIX 236

Query: 367 PDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGL 188
           P+V+T+NCLIKG+C+  R+ DA E+I EM  +GC PDKISYYTVM  LCKEKRI+E+R L
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLL 296

Query: 187 LEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
           +EKM KD+NLLPDQVTYNT +H+LSKHGH DEALE L+E+E + FR+DKVGYSA+VH+FC
Sbjct: 297 MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 356



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 48/173 (27%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = -1

Query: 526 KLRSAMRVLNLMQKDG-CSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTF 350
           +++    ++  M KD    P+    NT +H+L      ++AL FL   +      D V +
Sbjct: 289 RIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY 348

Query: 349 NCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRK 170
           + ++  FC   R+  A E++ EM ++GC PD ++Y +V+  LC+E+++ + + +L +M K
Sbjct: 349 SAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK 408

Query: 169 DANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAF 11
                P+ V+Y  +++ L K+G++ EA E++  SE   +  + + YS ++H F
Sbjct: 409 H-GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGF 460



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 54/182 (29%), Positives = 91/182 (50%)
 Frame = -1

Query: 553 LMVMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVG 374
           LM  + R GK   A  ++  M K G  P     N  I  L   +++++A RF+++    G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515

Query: 373 IEPDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVR 194
              +VV F  +I GFC    +  AL ++ +M      PD ++Y T++  L K+ RI+E  
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575

Query: 193 GLLEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHA 14
            L  KM +    +P  VTY TVIH   + G  ++ L+LL++  ++  +  +  Y+ V+  
Sbjct: 576 KLAMKMLR-VGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEK 632

Query: 13  FC 8
            C
Sbjct: 633 LC 634



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 45/178 (25%), Positives = 85/178 (47%)
 Frame = -1

Query: 541 YSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPD 362
           + R G++  A  ++N M   GC P++    + I+ L    ++++A + L +M + G +P+
Sbjct: 355 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414

Query: 361 VVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLE 182
            V++  L+ G C      +A EM+         P+ I+Y  +M    +E +  E   L+ 
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVR 474

Query: 181 KMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
           +M K     P  V  N +I  L +    DEA   +++    G  ++ V ++ V+H FC
Sbjct: 475 EMIK-KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFC 531



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 49/161 (30%), Positives = 76/161 (47%)
 Frame = -1

Query: 526 KLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFN 347
           K+  A R +     +GC+ N+    T IH     D LE AL  LD M      PDVVT+ 
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559

Query: 346 CLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKD 167
            +I       R+ +A ++  +M   G  P  ++Y TV+   C+  R++++  LLEKM   
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619

Query: 166 ANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRID 44
                 +  YN VI  L   G+ ++A +LL +      +ID
Sbjct: 620 QEC---RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 657


>ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 789

 Score =  402 bits (1034), Expect = e-110
 Identities = 195/308 (63%), Positives = 238/308 (77%)
 Frame = -1

Query: 931  QDQNIVEERGFQAATDESGNPLVRETCRLIGLRQSWNPKFEGQLRHLLRTMQPQQVCAVL 752
            Q QNI      +    E  +P+VRE CRLI L  +WNP FEG+LRHLLR+++P  VCAVL
Sbjct: 114  QTQNIAS---IEIDDSEFRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPSLVCAVL 170

Query: 751  RCQADLRVAANFFYWADRQWRYRHAPEVYYTMLEILSKTKLCQTAXXXXXXXXXXXXXXR 572
            R QAD RVA NFFYWADRQWRY H P VYYT+L++LSKTKLCQ A               
Sbjct: 171  RSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELS 230

Query: 571  PEVFGHLMVMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLD 392
            PE FG +MV YSRAGKLR+A+RVL LMQK G  PNLSICNT I+VLV   +LEKALRFL+
Sbjct: 231  PEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLE 290

Query: 391  RMQRVGIEPDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEK 212
            RMQ  GI+PD+VT+N LIKG+C+  R+ DALE+I  + ++GCPPDK+SYYTVM  LCKEK
Sbjct: 291  RMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEK 350

Query: 211  RIQEVRGLLEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGY 32
            +I++V+ L+EKM +D+NL+PDQVTYNT+IH+LSKHGHAD+AL  L+E+E KGF IDKVGY
Sbjct: 351  KIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGY 410

Query: 31   SAVVHAFC 8
            SA+VH+FC
Sbjct: 411  SAIVHSFC 418



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
 Frame = -1

Query: 667  YYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEV-FGHLMVMYSRAGKLRSAMRVLNLM 491
            YYT++  L K K  +                  +V +  L+ M S+ G    A+  L   
Sbjct: 339  YYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 398

Query: 490  QKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFNCLIKGFCNARRV 311
            +  G   +    +  +H      R+++A   +  M      PDVVT+  ++ GFC   R+
Sbjct: 399  EDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRI 458

Query: 310  ADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKDANLLPDQVTYNT 131
             +A +M+Q+M   GC P+ +SY  ++  LC   +  E R ++  + ++    P+ +TY  
Sbjct: 459  DEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMI-NVSEEHWWTPNAITYGV 517

Query: 130  VIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFCWN 2
            V+H   + G   EA +L +E   KGF    V  + ++ + C N
Sbjct: 518  VMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQN 560



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
 Frame = -1

Query: 571  PEVFGHLMVM--YSRAGKLRSAMRVLNLMQKDGCSPNL--------SICNT--------- 449
            P+V  +  ++  + R G++  A ++L  M K GC PN          +C++         
Sbjct: 440  PDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREM 499

Query: 448  ------------------AIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFNCLIKGFCN 323
                               +H      +L +A      M   G  P  V  N LI+  C 
Sbjct: 500  INVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQ 559

Query: 322  ARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKDANLLPDQV 143
             ++V +A + ++E  N+GC  + +++ TV+   C+   ++    +LE M   +N  PD V
Sbjct: 560  NQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYL-SNKHPDAV 618

Query: 142  TYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
            TY  +   L K G  DEA EL+ +  +KG     V + +V+H +C
Sbjct: 619  TYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYC 663



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
 Frame = -1

Query: 562  FGHLMVMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQ 383
            +G +M  + R GKL  A  +   M + G  P     N  I  L    ++ +A ++L+   
Sbjct: 515  YGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL 574

Query: 382  RVGIEPDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQ 203
              G   +VV F  +I GFC    +  AL ++++M      PD ++Y  +   L K+ R+ 
Sbjct: 575  NKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLD 634

Query: 202  EVRGLLEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQES-EAKGFRIDKVGYSA 26
            E   L+ KM     L P  VT+ +VIH   + G  D+ L LL    + K FR     Y+ 
Sbjct: 635  EAAELIVKM-LSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFR---TIYNH 690

Query: 25   VVHAFC 8
            V+   C
Sbjct: 691  VIEKLC 696


>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 737

 Score =  399 bits (1026), Expect = e-109
 Identities = 191/293 (65%), Positives = 235/293 (80%)
 Frame = -1

Query: 886 DESGNPLVRETCRLIGLRQSWNPKFEGQLRHLLRTMQPQQVCAVLRCQADLRVAANFFYW 707
           +E  +PLVRE CRLI  R +WN K EG LR LLR+++P+QVCAVL+ Q+D R+A +FFYW
Sbjct: 66  EEFRHPLVREVCRLIERRSAWNAKLEGDLRRLLRSLKPRQVCAVLQLQSDERIALDFFYW 125

Query: 706 ADRQWRYRHAPEVYYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEVFGHLMVMYSRAG 527
           A RQWRYRH P VYY ML++LSKTKLCQ A              RPE F H+MV YSRAG
Sbjct: 126 AGRQWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAG 185

Query: 526 KLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFN 347
           KLR+AM+VL +MQK G  PNL ICNTAIHVLVMA++LEKALRFL+RMQ VGI P+VVT+N
Sbjct: 186 KLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYN 245

Query: 346 CLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKD 167
           CLIKG+C+  +V  A+E+I EM  +GCPPDK+SYYTVM  LC++KRI+EVR L+EKM KD
Sbjct: 246 CLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKD 305

Query: 166 ANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
             L PDQVTYNT++H+LSKHGHADEALE L+E+E +GF++DKVGYSA+V++FC
Sbjct: 306 NKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFC 358



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 52/167 (31%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
 Frame = -1

Query: 505 VLNLMQK----DGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFNCLI 338
           V NLM+K    +   P+    NT +H+L      ++AL FL   +  G + D V ++ ++
Sbjct: 295 VRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIV 354

Query: 337 KGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKDANL 158
             FC   R+  A E++ EM  +GC PD ++Y  V+  LCK  +++E + +L++M K    
Sbjct: 355 NSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKH-GC 413

Query: 157 LPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVH 17
            P+ V+Y  +++ L +HG++ EA E++  SE   +  + + YS V+H
Sbjct: 414 KPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMH 460



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
 Frame = -1

Query: 667 YYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEV-FGHLMVMYSRAGKLRSAMRVLNLM 491
           YYT++  L + K  +                  +V +  L+ M S+ G    A+  L   
Sbjct: 279 YYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRET 338

Query: 490 QKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFNCLIKGFCNARRV 311
           ++ G   +    +  ++   M  R+++A   ++ M   G  PDVVT+  ++ G C   +V
Sbjct: 339 EERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKV 398

Query: 310 ADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKDANLLPDQVTYNT 131
            +A +M+Q+M   GC P+ +SY  ++  LC+     E R ++    +D    P+ +TY+ 
Sbjct: 399 EEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDW-WTPNAITYSV 457

Query: 130 VIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
           V+H L + G   EA ++++E   KGF    V  + ++ + C
Sbjct: 458 VMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLC 498



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 51/174 (29%), Positives = 82/174 (47%)
 Frame = -1

Query: 529 GKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTF 350
           G    A  ++N  ++D  +PN    +  +H L    +L +A   +  M   G  P  V  
Sbjct: 431 GNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEI 490

Query: 349 NCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRK 170
           N LIK  C  +++ +A + ++E  NRGC  + +++ TV+   C+   I     LL+ M  
Sbjct: 491 NLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYL 550

Query: 169 DANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
           + N  PD VT+  +I  L K G  +EA     +   KG     V Y AV+H +C
Sbjct: 551 N-NKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYC 603



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
 Frame = -1

Query: 571  PEVFGHLMVMYS--RAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRF 398
            P    + +VM+   R GKL  A  V+  M   G  P     N  I  L +  ++ +A +F
Sbjct: 450  PNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKF 509

Query: 397  LDRMQRVGIEPDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCK 218
            ++     G   + V F  +I GFC +  +  AL ++ +M      PD +++  ++  L K
Sbjct: 510  MEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGK 569

Query: 217  EKRIQEVRGLLEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKV 38
            + RI+E      KM K   L P  VTY  VIH   K G  +E ++LL +  ++     + 
Sbjct: 570  KGRIEEATVYTMKMLK-KGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS--KCRT 626

Query: 37   GYSAVVHAFC 8
             Y+ V+   C
Sbjct: 627  AYNQVIEKLC 636



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 42/146 (28%), Positives = 64/146 (43%)
 Frame = -1

Query: 526 KLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFN 347
           K+  A + +      GC+ N     T IH    +D ++ AL  LD M      PD VTF 
Sbjct: 502 KMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFT 561

Query: 346 CLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKD 167
            +I       R+ +A     +M  +G  P  ++Y  V+   CK  R++E+  LL KM   
Sbjct: 562 AIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSR 621

Query: 166 ANLLPDQVTYNTVIHVLSKHGHADEA 89
           +     +  YN VI  L   G+ + A
Sbjct: 622 SKC---RTAYNQVIEKLCNFGNPEAA 644


>ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
            chloroplastic-like [Glycine max]
          Length = 793

 Score =  399 bits (1024), Expect = e-108
 Identities = 189/292 (64%), Positives = 233/292 (79%)
 Frame = -1

Query: 883  ESGNPLVRETCRLIGLRQSWNPKFEGQLRHLLRTMQPQQVCAVLRCQADLRVAANFFYWA 704
            E  +P+VRE CRLI L  +WNP FEG+LRHLLR+++P  VCAVLR QAD RVA NFFYWA
Sbjct: 131  EFRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPPLVCAVLRSQADERVALNFFYWA 190

Query: 703  DRQWRYRHAPEVYYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEVFGHLMVMYSRAGK 524
            DRQWRY H P VYYTML++LSKTKLCQ A               PE FG++MV YSRAGK
Sbjct: 191  DRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGK 250

Query: 523  LRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFNC 344
            LR+A+RVL LMQK G  P+LSICNT I+VLV   +LEKAL+FL+RMQ  GI+PD+VT+N 
Sbjct: 251  LRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNS 310

Query: 343  LIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKDA 164
            LIKG+C+  R+ DALE+I  + ++GCPPDK+SYYTVM  LCKEK+I+EV+ L+EKM  ++
Sbjct: 311  LIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNS 370

Query: 163  NLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFC 8
            NL+PDQVTYNT+IH+LSKHGHAD+AL  L+E++ KGF IDKVGYSA+VH+FC
Sbjct: 371  NLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFC 422



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
 Frame = -1

Query: 667  YYTMLEILSKTKLCQTAXXXXXXXXXXXXXXRPEV-FGHLMVMYSRAGKLRSAMRVLNLM 491
            YYT++  L K K  +                  +V +  L+ M S+ G    A+  L   
Sbjct: 343  YYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 402

Query: 490  QKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFNCLIKGFCNARRV 311
            Q  G   +    +  +H      R+++A   +  M   G  PDVVT+  ++ GFC   R+
Sbjct: 403  QDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRI 462

Query: 310  ADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKDANLLPDQVTYNT 131
             +A +++Q+M   GC P+ +SY  ++  LC   +  E R ++  + ++    P+ +TY  
Sbjct: 463  DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMI-NVSEEHWWTPNAITYGA 521

Query: 130  VIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAFCWN 2
            V+H L + G   EA +L +E   KGF    V  + ++ + C N
Sbjct: 522  VMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQN 564



 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 48/174 (27%), Positives = 83/174 (47%)
 Frame = -1

Query: 532  AGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVT 353
            +GK   A  ++N+ ++   +PN       +H L    +L +A      M   G  P  V 
Sbjct: 494  SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553

Query: 352  FNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMR 173
             N LI+  C  ++V +A + ++E  N+GC  + +++ TV+   C+   ++    +L+ M 
Sbjct: 554  INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613

Query: 172  KDANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRIDKVGYSAVVHAF 11
                  PD VTY  +   L K G  DEA EL+ +  +KG     V Y +V+H +
Sbjct: 614  LSGK-HPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRY 666



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
 Frame = -1

Query: 562  FGHLMVMYSRAGKLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQ 383
            +G +M    R GKL  A  +   M + G  P     N  I  L    ++ +A ++L+   
Sbjct: 519  YGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL 578

Query: 382  RVGIEPDVVTFNCLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQ 203
              G   +VV F  +I GFC    +  AL ++ +M   G  PD ++Y  +   L K+ R+ 
Sbjct: 579  NKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLD 638

Query: 202  EVRGLLEKMRKDANLLPDQVTYNTVIHVLSKHGHADEALELLQES-EAKGFRIDKVGYSA 26
            E   L+ KM     L P  VTY +VIH  S+ G  D+ L LL++  + + FR     Y+ 
Sbjct: 639  EAAELIVKM-LSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFR---TVYNQ 694

Query: 25   VVHAFC 8
            V+   C
Sbjct: 695  VIEKLC 700



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 49/161 (30%), Positives = 76/161 (47%)
 Frame = -1

Query: 526  KLRSAMRVLNLMQKDGCSPNLSICNTAIHVLVMADRLEKALRFLDRMQRVGIEPDVVTFN 347
            K+  A + L      GC+ N+    T IH       +E AL  LD M   G  PD VT+ 
Sbjct: 566  KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYT 625

Query: 346  CLIKGFCNARRVADALEMIQEMSNRGCPPDKISYYTVMTLLCKEKRIQEVRGLLEKMRKD 167
             L        R+ +A E+I +M ++G  P  ++Y +V+    +  R+ ++  LLEKM K 
Sbjct: 626  ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR 685

Query: 166  ANLLPDQVTYNTVIHVLSKHGHADEALELLQESEAKGFRID 44
                P +  YN VI  L   G+ +EA +LL +      ++D
Sbjct: 686  Q---PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVD 723


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