BLASTX nr result

ID: Dioscorea21_contig00032082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032082
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] g...    77   1e-12
gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japo...    77   1e-12
gb|EAY87141.1| hypothetical protein OsI_08541 [Oryza sativa Indi...    77   1e-12
ref|XP_002524006.1| ring finger protein, putative [Ricinus commu...    76   2e-12
tpg|DAA36257.1| TPA: putative RING zinc finger domain superfamil...    74   9e-12

>ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group]
           gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING
           finger)-like [Oryza sativa Japonica Group]
           gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING
           finger)-like [Oryza sativa Japonica Group]
           gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa
           Japonica Group] gi|215697950|dbj|BAG92134.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 389

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
 Frame = -1

Query: 184 SIGNQEPWIPFEPTKDCSQGFCSIYCPQWCYII---XXXXXXXFSDNDQSSSGRTFSPLV 14
           ++G+Q  W+P+EPT+DCSQG CS+YCPQWCY I             +   SSG TFSPLV
Sbjct: 13  NLGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDITGSSSDDSSGPTFSPLV 72

Query: 13  ITI 5
           I I
Sbjct: 73  IAI 75


>gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japonica Group]
          Length = 386

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
 Frame = -1

Query: 184 SIGNQEPWIPFEPTKDCSQGFCSIYCPQWCYII---XXXXXXXFSDNDQSSSGRTFSPLV 14
           ++G+Q  W+P+EPT+DCSQG CS+YCPQWCY I             +   SSG TFSPLV
Sbjct: 10  NLGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDITGSSSDDSSGPTFSPLV 69

Query: 13  ITI 5
           I I
Sbjct: 70  IAI 72


>gb|EAY87141.1| hypothetical protein OsI_08541 [Oryza sativa Indica Group]
          Length = 386

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
 Frame = -1

Query: 184 SIGNQEPWIPFEPTKDCSQGFCSIYCPQWCYII---XXXXXXXFSDNDQSSSGRTFSPLV 14
           ++G+Q  W+P+EPT+DCSQG CS+YCPQWCY I             +   SSG TFSPLV
Sbjct: 10  NLGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDITGSSSDDSSGPTFSPLV 69

Query: 13  ITI 5
           I I
Sbjct: 70  IAI 72


>ref|XP_002524006.1| ring finger protein, putative [Ricinus communis]
           gi|223536733|gb|EEF38374.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
 Frame = -1

Query: 184 SIGNQEPWIPFEPTKDCSQGFCSIYCPQWCYII--XXXXXXXFSDNDQSSSGRTFSPLVI 11
           S+GNQ PW P++  KDC+QG CSIYCPQWCYII            +D   SG  FSPL+I
Sbjct: 3   SVGNQNPWAPYDTYKDCTQGICSIYCPQWCYIIFPPPPPFNLGGSDDGGDSGTDFSPLII 62

Query: 10  TI 5
            I
Sbjct: 63  AI 64


>tpg|DAA36257.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 406

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/60 (55%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -1

Query: 178 GNQEPWIPFEPTKDCSQGFCSIYCPQWCYII--XXXXXXXFSDNDQSSSGRTFSPLVITI 5
           G Q  W+P+EPTKDCSQG CS+YCPQWCY I            +   SSG  FSPLVI I
Sbjct: 10  GTQPTWVPYEPTKDCSQGLCSMYCPQWCYFIFPPPPPFDVGGPSPDDSSGPVFSPLVIAI 69


Top