BLASTX nr result

ID: Dioscorea21_contig00032072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032072
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japo...   191   7e-47
gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indi...   191   7e-47
ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group] g...   191   7e-47
tpg|DAA43586.1| TPA: hypothetical protein ZEAMMB73_728613 [Zea m...   185   3e-45
ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45

>gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japonica Group]
          Length = 1276

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/165 (57%), Positives = 119/165 (72%)
 Frame = -2

Query: 498 LASEEAWSYVQKMEVLGFDLDAVTFGILIVQSCIEGKLKSGFLFLAECFSRKIKPDVCAY 319
           + ++EAW   Q++EVLGF  DA TFGI I  SC E KLK+ FL+L+ECFSR I P VCAY
Sbjct: 385 IGTDEAWLVFQRLEVLGFVPDATTFGIFIRYSCRELKLKAAFLYLSECFSRHINPKVCAY 444

Query: 318 NALISGVFKEGMGQHAKVIYEDMIEKDLKPDLATFKILLAGYCVCRQFDEVKEVISKMVD 139
           NA+I G+FKEG+ +HAK ++EDM E+ + P+L T+KILLAGYC  RQFDE+++ +  M  
Sbjct: 445 NAIIGGIFKEGLYRHAKYVFEDMAERKIIPELLTYKILLAGYCRYRQFDEIEQTLRTMET 504

Query: 138 CGMISLAFTEDALSKAFMLLGLDHLGVKVKRDNYAGLLKAEFFRS 4
            G+  +      LSKA   LGLDHLGVKVKRDN AG  KAEFF S
Sbjct: 505 NGINDIPSGNCVLSKALSFLGLDHLGVKVKRDNAAGYPKAEFFDS 549


>gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
          Length = 1276

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/165 (57%), Positives = 119/165 (72%)
 Frame = -2

Query: 498 LASEEAWSYVQKMEVLGFDLDAVTFGILIVQSCIEGKLKSGFLFLAECFSRKIKPDVCAY 319
           + ++EAW   Q++EVLGF  DA TFGI I  SC E KLK+ FL+L+ECFSR I P VCAY
Sbjct: 385 IGTDEAWLVFQRLEVLGFVPDATTFGIFIRYSCRELKLKAAFLYLSECFSRHINPKVCAY 444

Query: 318 NALISGVFKEGMGQHAKVIYEDMIEKDLKPDLATFKILLAGYCVCRQFDEVKEVISKMVD 139
           NA+I G+FKEG+ +HAK ++EDM E+ + P+L T+KILLAGYC  RQFDE+++ +  M  
Sbjct: 445 NAIIGGIFKEGLYRHAKYVFEDMAERKIIPELLTYKILLAGYCRYRQFDEIEQTLRTMET 504

Query: 138 CGMISLAFTEDALSKAFMLLGLDHLGVKVKRDNYAGLLKAEFFRS 4
            G+  +      LSKA   LGLDHLGVKVKRDN AG  KAEFF S
Sbjct: 505 NGINDIPSGNCVLSKALSFLGLDHLGVKVKRDNAAGYPKAEFFDS 549


>ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group]
           gi|19071617|gb|AAL84284.1|AC073556_1 putative
           pentatricopeptide repeat containing protein [Oryza
           sativa Japonica Group] gi|108706387|gb|ABF94182.1|
           pentatricopeptide, putative [Oryza sativa Japonica
           Group] gi|113547561|dbj|BAF11004.1| Os03g0168400 [Oryza
           sativa Japonica Group]
          Length = 1337

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/165 (57%), Positives = 119/165 (72%)
 Frame = -2

Query: 498 LASEEAWSYVQKMEVLGFDLDAVTFGILIVQSCIEGKLKSGFLFLAECFSRKIKPDVCAY 319
           + ++EAW   Q++EVLGF  DA TFGI I  SC E KLK+ FL+L+ECFSR I P VCAY
Sbjct: 378 IGTDEAWLVFQRLEVLGFVPDATTFGIFIRYSCRELKLKAAFLYLSECFSRHINPKVCAY 437

Query: 318 NALISGVFKEGMGQHAKVIYEDMIEKDLKPDLATFKILLAGYCVCRQFDEVKEVISKMVD 139
           NA+I G+FKEG+ +HAK ++EDM E+ + P+L T+KILLAGYC  RQFDE+++ +  M  
Sbjct: 438 NAIIGGIFKEGLYRHAKYVFEDMAERKIIPELLTYKILLAGYCRYRQFDEIEQTLRTMET 497

Query: 138 CGMISLAFTEDALSKAFMLLGLDHLGVKVKRDNYAGLLKAEFFRS 4
            G+  +      LSKA   LGLDHLGVKVKRDN AG  KAEFF S
Sbjct: 498 NGINDIPSGNCVLSKALSFLGLDHLGVKVKRDNAAGYPKAEFFDS 542


>tpg|DAA43586.1| TPA: hypothetical protein ZEAMMB73_728613 [Zea mays]
          Length = 1072

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/165 (54%), Positives = 119/165 (72%)
 Frame = -2

Query: 498 LASEEAWSYVQKMEVLGFDLDAVTFGILIVQSCIEGKLKSGFLFLAECFSRKIKPDVCAY 319
           L + +AW   Q +E LGF  DA TFGI I  SC E KLKS  ++L+ECF+R +KP VCAY
Sbjct: 184 LGTCQAWLVFQSLEALGFAPDATTFGIFIFHSCREMKLKSALVYLSECFARHVKPGVCAY 243

Query: 318 NALISGVFKEGMGQHAKVIYEDMIEKDLKPDLATFKILLAGYCVCRQFDEVKEVISKMVD 139
           NA++ GVF+EG+ +HAK I+EDMIE+++ P+L+T+KI+LAGYC  R+FD++++V+  M  
Sbjct: 244 NAILGGVFREGLYRHAKYIFEDMIEREVTPNLSTYKIILAGYCRYRRFDDIEQVLRHMKT 303

Query: 138 CGMISLAFTEDALSKAFMLLGLDHLGVKVKRDNYAGLLKAEFFRS 4
            G+  L      LSKA   LGLDHLGVK+KRDN  G  KAEFF S
Sbjct: 304 NGVNVLLSGNCVLSKALSFLGLDHLGVKIKRDNVTGFPKAEFFDS 348


>ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like, partial [Brachypodium distachyon]
          Length = 1278

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/165 (55%), Positives = 115/165 (69%)
 Frame = -2

Query: 498 LASEEAWSYVQKMEVLGFDLDAVTFGILIVQSCIEGKLKSGFLFLAECFSRKIKPDVCAY 319
           L S+EAW   Q++E LGF  DA TFGI I  SC E KLK+ FL+L+ECFSR ++P V AY
Sbjct: 375 LGSDEAWFVFQRLEALGFTPDATTFGIFISHSCREMKLKAAFLYLSECFSRHVEPKVSAY 434

Query: 318 NALISGVFKEGMGQHAKVIYEDMIEKDLKPDLATFKILLAGYCVCRQFDEVKEVISKMVD 139
           NA+I  VF EG+ +HAK I+EDMIE+ + P+L T+K+LLAGYC  RQFD+++E++  M  
Sbjct: 435 NAIIGSVFTEGLYRHAKYIFEDMIERKIMPELLTYKVLLAGYCKYRQFDDIEEILRTMKT 494

Query: 138 CGMISLAFTEDALSKAFMLLGLDHLGVKVKRDNYAGLLKAEFFRS 4
            G+          SKA   LGLDHLGVKVKRDN  G  KAEFF S
Sbjct: 495 NGINDPPSGNCVFSKALSFLGLDHLGVKVKRDNATGFPKAEFFDS 539


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