BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032057
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294396.1| hypothetical chloroplast RF2 [Dioscorea elep...    56   3e-06
gb|AEK48536.1| photosystem I assembly protein Ycf2 (chloroplast)...    55   6e-06
ref|YP_005097917.1| photosystem I assembly protein Ycf2 (chlorop...    55   6e-06
gb|ABQ14933.1| Ycf2 [Saxifraga stolonifera]                            55   8e-06
emb|CAI53855.1| ycf2 [Acorus calamus]                                  54   1e-05

>ref|YP_001294396.1| hypothetical chloroplast RF2 [Dioscorea elephantipes]
           gi|149390416|ref|YP_001294415.1| hypothetical
           chloroplast RF2 [Dioscorea elephantipes]
           gi|205412894|sp|A6MMQ1.1|YCF2_DIOEL RecName:
           Full=Protein ycf2 gi|148668089|gb|ABR01473.1|
           hypothetical chloroplast RF2 [Dioscorea elephantipes]
           gi|148668108|gb|ABR01492.1| hypothetical chloroplast RF2
           [Dioscorea elephantipes]
          Length = 2260

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -2

Query: 228 EP*GILIKWSNGSNNFHKHLKHFISEQKNRFQVEF 124
           +P     KWSNGS NF KHL+HFISEQKNRFQV F
Sbjct: 782 DPDAYRYKWSNGSKNFQKHLEHFISEQKNRFQVVF 816


>gb|AEK48536.1| photosystem I assembly protein Ycf2 (chloroplast) [Colocasia
           esculenta] gi|340536789|gb|AEK48555.1| photosystem I
           assembly protein Ycf2 (chloroplast) [Colocasia
           esculenta]
          Length = 2308

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 207 KWSNGSNNFHKHLKHFISEQKNRFQVEF 124
           KWSNGSNNF +HL+HF+SEQ+NRFQV F
Sbjct: 818 KWSNGSNNFQEHLEHFVSEQRNRFQVVF 845


>ref|YP_005097917.1| photosystem I assembly protein Ycf2 (chloroplast) [Colocasia
           esculenta] gi|377819441|ref|YP_005097936.1| photosystem
           I assembly protein Ycf2 (chloroplast) [Colocasia
           esculenta] gi|340536683|gb|AEK48450.1| photosystem I
           assembly protein Ycf2 (chloroplast) [Colocasia
           esculenta] gi|340536702|gb|AEK48469.1| photosystem I
           assembly protein Ycf2 (chloroplast) [Colocasia
           esculenta]
          Length = 2308

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 207 KWSNGSNNFHKHLKHFISEQKNRFQVEF 124
           KWSNGSNNF +HL+HF+SEQ+NRFQV F
Sbjct: 818 KWSNGSNNFQEHLEHFVSEQRNRFQVVF 845


>gb|ABQ14933.1| Ycf2 [Saxifraga stolonifera]
          Length = 2274

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 228 EP*GILIKWSNGSNNFHKHLKHFISEQKNRFQVEF 124
           +P     KWSNGSNNF +HL+HF+SEQK+RFQV F
Sbjct: 810 DPNAYRYKWSNGSNNFQEHLEHFVSEQKSRFQVVF 844


>emb|CAI53855.1| ycf2 [Acorus calamus]
          Length = 2091

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -2

Query: 228 EP*GILIKWSNGSNNFHKHLKHFISEQKNRFQVEF 124
           +P     KWSNGS NF +HL+HF+SEQKNRFQV F
Sbjct: 683 DPNAYRYKWSNGSKNFQEHLEHFVSEQKNRFQVVF 717