BLASTX nr result

ID: Dioscorea21_contig00032042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032042
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281...   139   3e-31
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   135   3e-30
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   130   8e-29
ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
gb|AEV91157.1| R2R3-MYB protein [Triticum aestivum]                   130   1e-28

>ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281634|gb|ABM53274.1|
           GAMYB-like2 [Solanum lycopersicum]
          Length = 504

 Score =  139 bits (349), Expect = 3e-31
 Identities = 61/86 (70%), Positives = 71/86 (82%)
 Frame = -2

Query: 258 ERHGRMGPKDKISSPSIDECVSGGSMGGGTPLKKGPWTSTEDSLLVDYVQKHGEGNWNAV 79
           E   RM  +D + SPS +E   GG+ GGG PLKKGPWTS ED++LV+YV KHGEGNWNAV
Sbjct: 6   ESDDRMTSQDGVDSPSAEEACGGGNTGGGLPLKKGPWTSAEDAILVEYVTKHGEGNWNAV 65

Query: 78  QKYSGLSRCGKSCRLRWANHLRPNLK 1
           QK+SGL+RCGKSCRLRWANHLRP+LK
Sbjct: 66  QKHSGLARCGKSCRLRWANHLRPDLK 91


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/87 (72%), Positives = 71/87 (81%)
 Frame = -2

Query: 261 DERHGRMGPKDKISSPSIDECVSGGSMGGGTPLKKGPWTSTEDSLLVDYVQKHGEGNWNA 82
           +E    M  KD+  SP IDE  S GS GGG  LKKGPWTS+ED++LV+YV+KHGEGNWNA
Sbjct: 6   NESEDGMLSKDQTGSPLIDEGNSSGSAGGGIVLKKGPWTSSEDAILVEYVKKHGEGNWNA 65

Query: 81  VQKYSGLSRCGKSCRLRWANHLRPNLK 1
           VQK+SGL RCGKSCRLRWANHLRPNLK
Sbjct: 66  VQKHSGLFRCGKSCRLRWANHLRPNLK 92


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -2

Query: 234 KDKISSPSIDECVSGGSMGGGTPLKKGPWTSTEDSLLVDYVQKHGEGNWNAVQKYSGLSR 55
           KD+I SP  +    GGS  GG  LKKGPWTS ED++L++YV+KHGEGNWNAVQK+SGLSR
Sbjct: 15  KDRIDSPLAEGGNCGGSANGGAMLKKGPWTSAEDAILIEYVKKHGEGNWNAVQKHSGLSR 74

Query: 54  CGKSCRLRWANHLRPNLK 1
           CGKSCRLRWANHLRPNLK
Sbjct: 75  CGKSCRLRWANHLRPNLK 92


>ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|222845405|gb|EEE82952.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  130 bits (328), Expect = 8e-29
 Identities = 57/78 (73%), Positives = 67/78 (85%)
 Frame = -2

Query: 234 KDKISSPSIDECVSGGSMGGGTPLKKGPWTSTEDSLLVDYVQKHGEGNWNAVQKYSGLSR 55
           K +  SP+ DE   GG +GG TPLKKGPWTS ED++L+DYV+KHGEGNWN+VQK+SGL R
Sbjct: 15  KGRQDSPAADEVNDGGMVGGITPLKKGPWTSAEDAILIDYVKKHGEGNWNSVQKHSGLFR 74

Query: 54  CGKSCRLRWANHLRPNLK 1
           CGKSCRLRWANHLRP+LK
Sbjct: 75  CGKSCRLRWANHLRPDLK 92


>gb|AEV91157.1| R2R3-MYB protein [Triticum aestivum]
          Length = 552

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/83 (73%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 243 MGPKDKISSPSIDECVSGGS--MGGGTPLKKGPWTSTEDSLLVDYVQKHGEGNWNAVQKY 70
           M  +D++ SP  D+  SGGS   GGG PLKKGPWTS ED++LVDYV+KHGEGNWNAVQK 
Sbjct: 13  MHQEDQMDSPVGDDGSSGGSPHRGGGPPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKN 72

Query: 69  SGLSRCGKSCRLRWANHLRPNLK 1
           +GL RCGKSCRLRWANHLRPNLK
Sbjct: 73  TGLFRCGKSCRLRWANHLRPNLK 95


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