BLASTX nr result

ID: Dioscorea21_contig00032022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00032022
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea b...   211   4e-53
gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase ...   211   4e-53
ref|XP_003552082.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...   205   3e-51
gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate syntha...   204   9e-51
emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanth...   202   2e-50

>dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score =  211 bits (538), Expect = 4e-53
 Identities = 106/157 (67%), Positives = 123/157 (78%), Gaps = 5/157 (3%)
 Frame = -1

Query: 457 FFGSPSSSFDARKKFRVRA-----DGDGKAMIRKEKNEWKVDYSGEKPATPLLDTINYPI 293
           F  +P S+   RK+F +RA     D +GK MIRKEK+ WK+D+SGEKP TPLLDTINYP+
Sbjct: 17  FLKAPRSNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDFSGEKPPTPLLDTINYPV 76

Query: 292 HMKNLSVQELEQLAAELRADVVYTVSNTXXXXXXXXXXXXXXVALHHVFNTPEDRIIWDV 113
           H KNLS Q+LEQLAAELRAD+VY+VS T              VALHHVF+TP+D+IIWDV
Sbjct: 77  HTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVELAVALHHVFSTPDDKIIWDV 136

Query: 112 GHQAYSHKILTGRRSRMNTIRQTSGLAGFPKRDESVY 2
           GHQAY HKILTGRRSRM+TIR+TSGLAGFPKRDESVY
Sbjct: 137 GHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVY 173


>gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score =  211 bits (538), Expect = 4e-53
 Identities = 106/157 (67%), Positives = 123/157 (78%), Gaps = 5/157 (3%)
 Frame = -1

Query: 457 FFGSPSSSFDARKKFRVRA-----DGDGKAMIRKEKNEWKVDYSGEKPATPLLDTINYPI 293
           F  +P S+   RK+F +RA     D +GK MIRKEK+ WK+D+SGEKP TPLLDTINYP+
Sbjct: 17  FLKAPRSNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDFSGEKPPTPLLDTINYPV 76

Query: 292 HMKNLSVQELEQLAAELRADVVYTVSNTXXXXXXXXXXXXXXVALHHVFNTPEDRIIWDV 113
           H KNLS Q+LEQLAAELRAD+VY+VS T              VALHHVF+TP+D+IIWDV
Sbjct: 77  HTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVELAVALHHVFSTPDDKIIWDV 136

Query: 112 GHQAYSHKILTGRRSRMNTIRQTSGLAGFPKRDESVY 2
           GHQAY HKILTGRRSRM+TIR+TSGLAGFPKRDESVY
Sbjct: 137 GHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVY 173


>ref|XP_003552082.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  205 bits (522), Expect = 3e-51
 Identities = 104/156 (66%), Positives = 120/156 (76%), Gaps = 5/156 (3%)
 Frame = -1

Query: 454 FGSPSSSFDARKKFRVRADGDGKA-----MIRKEKNEWKVDYSGEKPATPLLDTINYPIH 290
           + +PS     R KF VR    G A     +I+KEK+ WK++Y+GEKPAT LLDTINYPIH
Sbjct: 21  YKAPSPYHSYRNKFCVRVSASGSADEERTIIKKEKDGWKINYAGEKPATLLLDTINYPIH 80

Query: 289 MKNLSVQELEQLAAELRADVVYTVSNTXXXXXXXXXXXXXXVALHHVFNTPEDRIIWDVG 110
           MKNLS Q+LEQLAAELRAD+V+TVSNT              VALHHVFNTPED+IIWDVG
Sbjct: 81  MKNLSTQDLEQLAAELRADIVHTVSNTGGHLSSSLGVVELAVALHHVFNTPEDKIIWDVG 140

Query: 109 HQAYSHKILTGRRSRMNTIRQTSGLAGFPKRDESVY 2
           HQAY HKILTGRRSRM+TIR+TSGLAGFPKRDES++
Sbjct: 141 HQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESIH 176


>gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 713

 Score =  204 bits (518), Expect = 9e-51
 Identities = 102/149 (68%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
 Frame = -1

Query: 445 PSSSFDARKKFRVRADGD-GKAMIRKEKNEWKVDYSGEKPATPLLDTINYPIHMKNLSVQ 269
           P   F AR        GD GK MIRKE + WK+D+SGEKP TPLLDTIN+P+HMKNLSVQ
Sbjct: 27  PQKQFFARASVSKSDGGDEGKLMIRKENDGWKIDFSGEKPPTPLLDTINFPVHMKNLSVQ 86

Query: 268 ELEQLAAELRADVVYTVSNTXXXXXXXXXXXXXXVALHHVFNTPEDRIIWDVGHQAYSHK 89
           +LEQLAAELRAD+VYTV+                VALHHVFNTP+D+IIWDVGHQAY HK
Sbjct: 87  DLEQLAAELRADIVYTVAKIGGHLSASLGVVDLAVALHHVFNTPDDKIIWDVGHQAYPHK 146

Query: 88  ILTGRRSRMNTIRQTSGLAGFPKRDESVY 2
           ILTGRRSRM+TIR+TSGLAGFPKRDES Y
Sbjct: 147 ILTGRRSRMHTIRKTSGLAGFPKRDESTY 175


>emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/157 (64%), Positives = 121/157 (77%), Gaps = 9/157 (5%)
 Frame = -1

Query: 445 PSSSFDARKKFRVRADG--------DGKAM-IRKEKNEWKVDYSGEKPATPLLDTINYPI 293
           P  ++ ARK+F +RA          +GK + I+KEK+ WK+D+SGEKP TPLLDTINYP+
Sbjct: 22  PRLNYTARKQFCLRASSVNSSNDAEEGKMISIKKEKDGWKIDFSGEKPPTPLLDTINYPV 81

Query: 292 HMKNLSVQELEQLAAELRADVVYTVSNTXXXXXXXXXXXXXXVALHHVFNTPEDRIIWDV 113
           HMKNLS  +LEQLAAELRA++VY+V+ T              VALHHVFNTPEDRIIWDV
Sbjct: 82  HMKNLSAHDLEQLAAELRAEIVYSVAKTGGHLSASLGVVDLTVALHHVFNTPEDRIIWDV 141

Query: 112 GHQAYSHKILTGRRSRMNTIRQTSGLAGFPKRDESVY 2
           GHQAY HKILTGRRS+M+TIRQTSGLAGFPKRDES+Y
Sbjct: 142 GHQAYPHKILTGRRSKMHTIRQTSGLAGFPKRDESIY 178


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