BLASTX nr result
ID: Dioscorea21_contig00031962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00031962
(357 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containi... 145 3e-33
ref|XP_003627685.1| Pentatricopeptide repeat-containing protein ... 145 3e-33
ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|2... 141 6e-32
emb|CBI28186.3| unnamed protein product [Vitis vinifera] 134 8e-30
ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi... 134 8e-30
>ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 145 bits (367), Expect = 3e-33
Identities = 64/119 (53%), Positives = 92/119 (77%)
Frame = +1
Query: 1 ANLGFIEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSKPNQYTFGS 180
A F+++++++F + ++EIISWNA+ISGYAQN LC+EALE F ++ KPN+YTFGS
Sbjct: 415 AKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKPNEYTFGS 474
Query: 181 ILSAISFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEETT 357
+L+AIS + + L +GQRCHS ++K GLN D +SGAL+D+YAK G I +SQ+VF ET+
Sbjct: 475 VLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETS 533
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 10 GFIEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSKPNQYTFGSI-- 183
G +E + +F+++ +I+SWN ++SG+ E E S L N F S+
Sbjct: 122 GQLERAFSVFQNLHDPDIVSWNTILSGF-------EKSENALSFALRMNLNGVKFDSVTY 174
Query: 184 LSAISF-VQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEE 351
+A+SF + +G + H+ +K G D +V AL+ +Y++ + D++KVF+E
Sbjct: 175 TTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDE 231
>ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344437|ref|XP_003636296.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|358345563|ref|XP_003636846.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355502231|gb|AES83434.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355502781|gb|AES83984.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355521707|gb|AET02161.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 791
Score = 145 bits (367), Expect = 3e-33
Identities = 66/113 (58%), Positives = 88/113 (77%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSKPNQYTFGSILSAI 195
I+ES KIF+ + ++ ISWNA+ISGYAQN LC+EA TF S + KPNQYTFGS+L+AI
Sbjct: 437 IQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAI 496
Query: 196 SFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEET 354
+ + + L +GQRCHS ++K GLNTD +V+GAL+D+Y K G IN+SQ+VF ET
Sbjct: 497 AAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNET 549
Score = 57.8 bits (138), Expect = 9e-07
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 10 GFIEESNKIFKSIEHKEIISWNAMISGYAQNRLCE--EALETFSSLLLHSKPNQYTFGSI 183
G ++E+ ++F + ++++SWNAM+SGYAQ C EA+ F +++ + S+
Sbjct: 236 GGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHV--SL 293
Query: 184 LSAISFV-QTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEE 351
AIS T L +G++ H K G T V LI Y+K + D++ VF++
Sbjct: 294 TGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQD 350
>ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|222866931|gb|EEF04062.1|
predicted protein [Populus trichocarpa]
Length = 770
Score = 141 bits (355), Expect = 6e-32
Identities = 65/113 (57%), Positives = 89/113 (78%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSKPNQYTFGSILSAI 195
+++S K+F+ +++++II+WNA+ISG+ N LC+EA+ F S L+ SKPNQY+FGSIL+AI
Sbjct: 413 MQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAI 472
Query: 196 SFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEET 354
+ V L YGQRCHS+I+K GLNTD VS AL+D+YAK G I +SQKVF ET
Sbjct: 473 GAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVET 525
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Frame = +1
Query: 34 IFKSIEHKEIISWNAMISGYAQNRLCEEALETFS-SLLLHSKPNQYTFGSILSAISFVQT 210
IF+++ H +I+SWN ++SG C+ + + FS + ++S + + + +SF
Sbjct: 121 IFENLTHPDIVSWNTVLSG------CQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWR 174
Query: 211 VPLSY---GQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEE 351
+Y G + HS IVK G + + +V ALI +Y++ G + ++++VFEE
Sbjct: 175 HVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEE 224
Score = 54.7 bits (130), Expect = 8e-06
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSK-PNQYTFGSILSA 192
IE++ +F+++ + ++SW MIS EA+ F+ + L PN TF ++ A
Sbjct: 317 IEDARLVFQNMNERNVVSWTTMISIDEA-----EAVSFFNEMRLDGVYPNDVTFVGLIHA 371
Query: 193 ISFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEE 351
I+ + V G+ H K+G ++ V ++I +YAK + DS KVF+E
Sbjct: 372 ITIGELVV--QGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQE 422
>emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 134 bits (337), Expect = 8e-30
Identities = 61/113 (53%), Positives = 88/113 (77%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSKPNQYTFGSILSAI 195
+ +S K+F+ + ++EIISWN++ISGYAQN L +EAL+TF S L+ S+PN++TFGS+LS+I
Sbjct: 402 MSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSI 461
Query: 196 SFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEET 354
+ + + + +GQRCHS I+K GLNT+ VS AL+D+YAK G I +S VF ET
Sbjct: 462 ASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSET 514
Score = 58.9 bits (141), Expect = 4e-07
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSK-PNQYTFGSILSA 192
IE++ +F+SI + ++SW MIS E+A F+ + PN TF ++ A
Sbjct: 306 IEDAKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHA 360
Query: 193 ISFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEE 351
I+ V GQ H VK+ ++ VS +LI +YAK ++DS KVFEE
Sbjct: 361 ITMKNLV--EEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEE 411
>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 134 bits (337), Expect = 8e-30
Identities = 61/113 (53%), Positives = 88/113 (77%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSKPNQYTFGSILSAI 195
+ +S K+F+ + ++EIISWN++ISGYAQN L +EAL+TF S L+ S+PN++TFGS+LS+I
Sbjct: 425 MSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSI 484
Query: 196 SFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEET 354
+ + + + +GQRCHS I+K GLNT+ VS AL+D+YAK G I +S VF ET
Sbjct: 485 ASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSET 537
Score = 60.1 bits (144), Expect = 2e-07
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 22 ESNKIFKSIEHKEIISWNAMISGYAQ--NRLCEEALETFSSLLLHSKPNQYTFGSILSAI 195
E+ ++F + +K+++SWNAM+SGYAQ N E L L K + +F +SA
Sbjct: 229 EARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISAC 288
Query: 196 SFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFE 348
+ L G++ HS VK G +T V LI Y+K I D++ VFE
Sbjct: 289 GHGKEFEL--GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFE 337
Score = 58.9 bits (141), Expect = 4e-07
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +1
Query: 16 IEESNKIFKSIEHKEIISWNAMISGYAQNRLCEEALETFSSLLLHSK-PNQYTFGSILSA 192
IE++ +F+SI + ++SW MIS E+A F+ + PN TF ++ A
Sbjct: 329 IEDAKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHA 383
Query: 193 ISFVQTVPLSYGQRCHSRIVKSGLNTDKYVSGALIDLYAKHGGINDSQKVFEE 351
I+ V GQ H VK+ ++ VS +LI +YAK ++DS KVFEE
Sbjct: 384 ITMKNLV--EEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEE 434